Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2279 ATGCTTATCGACTTTGACAATGCAGTACAACAAGCTGGTGGAATACAAAAGTACTTATATTTGGCTGCAAAATCAAATAGGTATTGTTGTACCGTGAAATATGCTAACTCCAATAAGACAAATCTGTGCTTAAACCAGATTCAAACTTCTGCTCTAAATGCTGCAATTGAGCTCAATCTATTTGAGATCATAGCTAGGGCTCATGGTGGGAGACACGTGTCAGCTTCTGAAGTCGCCTCTCAGCTTCCAAATCTAGTCCAACATCAAGACTTGGCTTTCAGGCTGGATCGTCTCTTAAGGCTTCTAGTCCACTCATCTCTTCTCACTTGTTCTTATGTCGCCAACCAAGGTGGCGACACtcaaggagagagagagagagactctATGGGATTTCTCCTGTGGGCAAATTCTTTGGTTAACTTTAAGGATGCCATTACAGACAAAGACACTGACCTGTTCAAGAAAGTTCATGGAATATCCTTTTTCCATTATGCACAGAAAGACCCAACATTGATTAACTTGTTCAACAAATCAATGTCCAACCTTAGCTTTATCTTCATGAAAAGGATACTTGAAGTATACAAAGGATTTGAGGGAATTTCAACACTTGTTGATGTGGGAGGTGGTAattctcaaaccctaaaaatgATACTCTCTAAGTATCCTTCAATTAAAGGTATCAATTTTGATTTACCCCACGTCATTCAGAAGGCACCATCTCATccagGGATAGAGCAtattggaggagatatgttTGTAAGTGTTCCAAAAGGTGATGCCATAATATTGAAGAACGTATGCCACAATTGGTCGGATGAAAATTGCATCAAAATTATGAGGAAATGCTATGAAGCATTGGCAGAAAATGGGAAGTTGATTGTGGTGGAATTCATAATGCCAGAAGTGGATACTATGGCATCGGAAGAAGGCAAATATCTTTGCTCTCTTGACAACCTCATGTTTCTTTTTGATGGCAGAGAAAGAAGTGAGAAAGAGATGGAGTCTCTCTGTAAAACCTCTGGATTTTCTGCTTTCAAAATTGCTTCTCGTGCCTTCTCTATCTTAGGAGTTATGGAATTTTACAAataa 1089 0.3673 MLIDFDNAVQQAGGIQKYLYLAAKSNRYCCTVKYANSNKTNLCLNQIQTSALNAAIELNLFEIIARAHGGRHVSASEVASQLPNLVQHQDLAFRLDRLLRLLVHSSLLTCSYVANQGGDTQGERERDSMGFLLWANSLVNFKDAITDKDTDLFKKVHGISFFHYAQKDPTLINLFNKSMSNLSFIFMKRILEVYKGFEGISTLVDVGGGNSQTLKMILSKYPSIKGINFDLPHVIQKAPSHPGIEHIGGDMFVSVPKGDAIILKNVCHNWSDENCIKIMRKCYEALAENGKLIVVEFIMPEVDTMASEEGKYLCSLDNLMFLFDGRERSEKEMESLCKTSGFSAFKIASRAFSILGVMEFYK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2279 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 35 119 - -
Sto4g2279 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 138 362 - -
Sto4g2279 362 PANTHER O-METHYLTRANSFERASE 35 119 IPR016461 GO:0008168
Sto4g2279 362 PANTHER O-METHYLTRANSFERASE 138 362 IPR016461 GO:0008168
Sto4g2279 362 CDD AdoMet_MTases 202 299 - -
Sto4g2279 362 Pfam O-methyltransferase domain 141 343 IPR001077 GO:0008171
Sto4g2279 362 PIRSF O-mtase 132 362 IPR016461 GO:0008168
Sto4g2279 362 PIRSF O-mtase 29 128 IPR016461 GO:0008168
Sto4g2279 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 359 IPR029063 -
Sto4g2279 362 SUPERFAMILY "Winged helix" DNA-binding domain 41 125 IPR036390 -
Sto4g2279 362 Pfam Dimerisation domain 51 103 IPR012967 GO:0046983
Sto4g2279 362 Gene3D Vaccinia Virus protein VP39 172 349 IPR029063 -
Sto4g2279 362 Gene3D - 49 190 IPR036388 -
Sto4g2279 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 40 362 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2279 Sto-Chr4 24187459 24194549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2279 51 354 Monolignol Biosynthesis Gene Families AT5G54160 47.546 1.72e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2279 - - gmx:100787536 330.872