Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2277 ATGGCTTTTGAAGCTCATCACCACCaccatgaagaagaagatgattctTCTTTCGTTTCAGCCATGCTTCCATGCGTTACCCAAATCCATTCTGCATCTCTAAATGCTGCCATTGAGCTCAACTTGTTTGAGATCATAGCTAGGGCAAATGGGAGACACGTGTCGGCCATTGAAGTGGCTTCTCAACTTCCAACTTCAATGCAACACCAAGATTTGGCTTTTAGATTAGATCGAGTCCTAAGGCTTCTTGCTACTCAATCCCTTCTCACTTGTTCCTACTATGGCGTCAGTCCTGGTGGCGACACTCAAAGAGAGAGACTCTATGCAATCTCTCCCATTGGGAAGTTCTTTGTTGGTGCTAACCATAACAGTGGATGCATGTCTTTGTTCTCATCATTCATGAGCCATCCACCACTTGTGGATTCTTGCTTTGTGTTGCAAATGTGTGGTCCAGCACTCCAGCTTTCTGTCATGCGTGGgctTAATTTTAAGGATGCAATAATAAGCGAAGACACCGATCTCTTCAAGAAAGTTCATGGTATACCCTACTACCAATACTTAGACACAGACCCAAAGTTGAATAACTTGTTCAACAAATCAATGGCAGACATTAGCTTTATGATGATGAAAAGGATACTTGAAATATACAAAGGATTTGAGGGAATTTCAACACTTGTGGACGTGGGAGGTGGGATAGAGCAtattggaggagatatgttTGCAAGTGTTCCAAAAGGTGATGCCATAATATTGAAGGTCAGTGCTATATGCCACAATTGGTCAGATGAGAGTAGCATACAGATTCTGAAGAAATGCTACGAATCATTGCCAGAAAATGGGAAAGTGATAATCATTGAATTCATAATGTCAGAAACGATTGAGCCCTCAGAAGAATCCAAGCTTCTTTGTAGCCTTGACAACCTCATGTTTCTCCATAATGGAAGAGAAAGAACAGAGAAAGAGTATGAATTCTTGTGCAAGCAATCTGGATTTTCTGCTTTCAAAGTTGCTTCTCGTGCCTTCTCTATTCTAGGAGTCATGGAATTTTACAAGTAA 1056 0.3977 MAFEAHHHHHEEEDDSSFVSAMLPCVTQIHSASLNAAIELNLFEIIARANGRHVSAIEVASQLPTSMQHQDLAFRLDRVLRLLATQSLLTCSYYGVSPGGDTQRERLYAISPIGKFFVGANHNSGCMSLFSSFMSHPPLVDSCFVLQMCGPALQLSVMRGLNFKDAIISEDTDLFKKVHGIPYYQYLDTDPKLNNLFNKSMADISFMMMKRILEIYKGFEGISTLVDVGGGIEHIGGDMFASVPKGDAIILKVSAICHNWSDESSIQILKKCYESLPENGKVIIIEFIMSETIEPSEESKLLCSLDNLMFLHNGRERTEKEYEFLCKQSGFSAFKVASRAFSILGVMEFYK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2277 351 PIRSF O-mtase 1 233 IPR016461 GO:0008168
Sto4g2277 351 PIRSF O-mtase 231 351 IPR016461 GO:0008168
Sto4g2277 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 165 348 IPR029063 -
Sto4g2277 351 PANTHER O-METHYLTRANSFERASE 11 231 IPR016461 GO:0008168
Sto4g2277 351 PANTHER O-METHYLTRANSFERASE 231 351 IPR016461 GO:0008168
Sto4g2277 351 Gene3D Vaccinia Virus protein VP39 232 351 IPR029063 -
Sto4g2277 351 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 231 351 - -
Sto4g2277 351 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 231 - -
Sto4g2277 351 Gene3D - 2 117 IPR036388 -
Sto4g2277 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 351 IPR016461 GO:0008168
Sto4g2277 351 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Sto4g2277 351 SUPERFAMILY "Winged helix" DNA-binding domain 13 120 IPR036390 -
Sto4g2277 351 Pfam O-methyltransferase domain 232 332 IPR001077 GO:0008171
Sto4g2277 351 Gene3D Vaccinia Virus protein VP39 144 231 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2277 Sto-Chr4 24177478 24180080 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2277 14 343 Monolignol Biosynthesis Gene Families AT5G54160 38.525 3.74e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2277 - - gmx:100787536 328.946