Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2261 ATGACAAAGAGGAAGAGCTGGTTTAGTGTGGTGAAGAGGCTCTTTATATGGGACACACAGTCCAAACAAGAGAAGaaggaaaagagaaggaaatggATGTTTGGAATTGGAAGGCTTAAGATAAAAAGATTACCATCTATAACAGCCCCGCCAACAGAATCTAAGGAAAGAAAACAAGATGTAATAGAGTTCACTGCCCATCAATGTAATGAAGAAACTGAAGACTTTCAAATTGTTAAATCTGGAAGAAACGAGGCTGCACAACCCACTTACAAATGCCAGAGAGAGATTGAAGAATCTGCAGCCATCAAAATTCAAACTGCTTTTAGGGGTTATCTTGCAAAAAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATTATTCGCGGCAGAGCAGTAAGACGCCAAGCTATGAGCACTCTGAAGTGCTTGCAGTCCATTGTAGATATCCAATCACAGGTCTGCGCTAGGAGACTCCAAATGGTTGAAAAGAGATGTGACTGTGATGAAAAGGAAGAGATTCCAAGTTCAAGAGACAAGATAATAAGGATGGATTCAAACAGTGAAAGAAGGTGGGATGACAGAATTTTGTTGAAGGAGGAGACAAATGCTTCTCACATGAGTAAGAAAGAAGCTGCacttaagagagagagaataaaagGATACTCATTTAACCATAGGAGATCAGCAGAATCAGAAAGAAATAAAGTAAATGGAAGATGGAGGTATTGGCTGGAGCAATGGGTAGATACCCAACTTTCCAAAAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCCAGAGCTGGGGAggatgaaggaggaagaagacaGCTTAATCAGAGAAACTTCCAGACTCATTCTCCAAAACTTGCTCCATTAAGAAAACCCTTTCCTCACAGGAGGCAATCTTCACTGGGAAATGATGATCCTTCATCACTTTCAAGCCCTCCTGCACTTCCAGCTTACATGGCAGCAACCGAGTCGGCAAGAGCAAAAGCAAGATCCTCAAGCTCCCCAAAACTAAGAACACTGAATTTGGAAACAAACTTTGATATTGGGAATTCACCATGCAAGAAGAAGCTGTCTCCTCTTGTGTCTTTGTCTTCCATTAACAATGACGTGCTTCTCAGTAATAATAGTAACAATGGCCATCTGGGGAAGCTCAAAGGTAATAATAGTAGTAGCCAGCAAGGATCTCCAAGCTTAAAGGGGCTTTCAGGGCCTATAAGATCAAGCAGGACAATGAAGGATCTCAGCATTAATTCAGACTCCTCATTTCTGAGTGCACACACCAGCATTCATAAAATTCTTTAG 1335 0.3933 MTKRKSWFSVVKRLFIWDTQSKQEKKEKRRKWMFGIGRLKIKRLPSITAPPTESKERKQDVIEFTAHQCNEETEDFQIVKSGRNEAAQPTYKCQREIEESAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVDIQSQVCARRLQMVEKRCDCDEKEEIPSSRDKIIRMDSNSERRWDDRILLKEETNASHMSKKEAALKRERIKGYSFNHRRSAESERNKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAGEDEGGRRQLNQRNFQTHSPKLAPLRKPFPHRRQSSLGNDDPSSLSSPPALPAYMAATESARAKARSSSSPKLRTLNLETNFDIGNSPCKKKLSPLVSLSSINNDVLLSNNSNNGHLGKLKGNNSSSQQGSPSLKGLSGPIRSSRTMKDLSINSDSSFLSAHTSIHKIL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2261 444 Gene3D - 96 146 - -
Sto4g2261 444 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Sto4g2261 444 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Sto4g2261 444 Pfam Protein of unknown function (DUF4005) 314 369 IPR025064 -
Sto4g2261 444 PANTHER IQ-DOMAIN 11 5 429 - -
Sto4g2261 444 SMART iq_5 97 119 IPR000048 GO:0005515
Sto4g2261 444 MobiDBLite consensus disorder prediction 271 326 - -
Sto4g2261 444 MobiDBLite consensus disorder prediction 388 417 - -
Sto4g2261 444 PANTHER IQ-DOMAIN 5-RELATED 5 429 - -
Sto4g2261 444 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2261 Sto-Chr4 24043263 24045589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2261 1 435 IQD Protein Family AT5G13460 46.957 1.87e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2261 - - gmx:100800192 461.455