Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2253 ATGATTAAGGTAACTCAGACCCAGTACATTGGGTATAGTTTCTTACTTTTTTGTTGTCTTGGATCAGCTGTGAGTGAGTCTCCATTCATGGAAAGTActattgatgatgaagatgtcAAGCTTTCGGTTCCCGATAATGCTCGGCCGTCCTCGAATCCAGAATCATCTACCAATTCTCAGGCTGCAAGAGAATCTGTGACAAAAGTTTTTGcatctgaagaagaagaagatgaagatgatgatcacAAGGAGCATGCCATTACCAAGTCAAAACCAAGAAGGCCTTCAGGTAACAAAGAAGCAGTAAGAAAGtacagagagaagaagaaggcttACACAGCTTATTTGGAGGATCAAGTCAAGAAATTGCATCTGCAGAAtcagcaactagtgaggaaactTCAAGGGCAAGCAATTCTTCAAGCAGAGATTTTGAGGTTGAGAGGCATTTTGGTGGATTTCATgaggaaaattgatgatgactTGGGTTTTTCTCCCTATAAAAAGCAGTGTACCTCTCCTACTTTTTTTCGGTCTCGGACCGATTTTCCGTGCTTCAGTCCGGCCTTCGTAGATCGTCGAGTGAACGTAGGTAAGAAGGCGAATGCCGAAGAAGAAACCGTGGAAGAGACGAGTGATTAG 642 0.3551 MIKVTQTQYIGYSFLLFCCLGSAVSESPFMESTIDDEDVKLSVPDNARPSSNPESSTNSQAARESVTKVFASEEEEDEDDDHKEHAITKSKPRRPSGNKEAVRKYREKKKAYTAYLEDQVKKLHLQNQQLVRKLQGQAILQAEILRLRGILVDFMRKIDDDLGFSPYKKQCTSPTFFRSRTDFPCFSPAFVDRRVNVGKKANAEEETVEETSD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2253 213 MobiDBLite consensus disorder prediction 82 103 - -
Sto4g2253 213 SMART brlzneu 84 153 IPR004827 GO:0003700|GO:0006355
Sto4g2253 213 MobiDBLite consensus disorder prediction 35 103 - -
Sto4g2253 213 Gene3D - 91 140 - -
Sto4g2253 213 SUPERFAMILY Leucine zipper domain 92 147 IPR046347 GO:0003700|GO:0006355
Sto4g2253 213 MobiDBLite consensus disorder prediction 45 66 - -
Sto4g2253 213 Pfam Basic region leucine zipper 90 135 IPR004827 GO:0003700|GO:0006355
Sto4g2253 213 PANTHER BASIC LEUCINE ZIPPER 23 67 172 - -
Sto4g2253 213 PANTHER CCAAT/ENHANCER BINDING PROTEIN 67 172 - -
Sto4g2253 213 CDD bZIP 93 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2253 Sto-Chr4 23955330 23956264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2253 22 169 bZIP Transcription Factor Family AT4G35040 39.865 1.25e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto4g2253 bZIP_2 2.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2253 K25785 - zju:107417784 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2253 4 23955330 23956264 Sto4g2253 4 23955330 23956264 ECH