Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2250 ATGGGTTACTTCTCCTGCTCTGCCGAATCCTCCATCTCAACCTCCACTCCTctccctccttcttcttcttccttcaacAACATCCACCACTTCCCTTACTCCGACCTCGTCGCCGCCACCAACGACTTCTCCCCCCACAACCTCCTCGGCAAAGGCACCCATTCCCACGTCTACAAAGCCACCCTTCGTGGCCTCCCCGTCGCCATCAAGAAACCCACTTCCCCTGAAATCGCCAACGAGATTGACGTTTTGTCCAAAATCCACAGCCCCCACTTAGTCAACCTCCTCGGTTTCGCCACTGATTCGTCTCCAAAATCAGAACACACTCTTCTATTAGTGGTCGAATTCATGACCAATGGCTCTCTCTACGACCTCCTTCATTCCAATTCCGATTCCAATCCCAAATTTCTCAATTGGGGTCGAAGAATCCGATTGGCTTTACAAATTGCAAAAGCAATCCATACCCTTCATGCCTCCACACCCCCTATAATCCACAGAGACATCAAATCTTCAAACATCCTCATTGACTCGAACTTCAGTGCAAGATTGGGGGATTTTGGGCTAGCCATAAGAGCTTATGATTCTTCTTCCTTTGGTAAACTTAGTTTCAAGTTCAGATCAATCCCACCAGCAGGAACAATGGGGTATCATGATCCCCACTATGTGACCCCAGAATGTTTGAGCACTAAAAATGATGTCTTTAGTTTTGGGGTTTTGCTGTTGGAGATTATGAGTGGAAGGAAAGCCATTGATGTCACACACTCTCCTTCATCCATTCTGGATTGGGCCATTCCTCTCATCAAGAGAAGGAAGGTTCTTGGTGTTTATGATCCAAGAATTGGACCTCCTAAGGATTTGGTGGTGAGGAAGCAATTGGGTGTGATTGCTGCAAAATGTGTGAGGTCTTGTGGGGAAAGAAGGCCTGAAATGAAGGATGTGGTGGGTTGGCTTAGTGGGTTGTGTAAATTGGAGGCTCTTCATTATCATCATTCATGGAATCATTATTATGGATTTAACTTCAACATTAATGTTAGTAATCCTTGCATGATGGTTGAGACTTATGTGGGAAAATTTGATGGGGGATTGATGAGGGATTCCAGGAGGGTGTTTTCTGATGTGGGGTTTAGTAGTAATTTGATGGAGCTTAtggagaaggagagggaggtAGTGAAAGTTTGTGGTGGATCAAGGTTTGGGAGTGGGAGTGAAAAGCTCCGTTTCCCCAAAGCTCAAGAGTTCTATAAATGGATCAAGTTTGCATCAAGAAAAGGCAAACTTATCTTGCTCAACCATGTCAAACTTCAGATGCTTTTAAAGACAGACGATGTGAAAGAAGCAGAGACTGCAAAAATTGTATTAAGAGCAAAGAACCAAAACCCTGCACCTGCAAATATAGAGAAAGGCAATCTTGTGTACATCTATGAAAGGGTGCTGGAGCAGCTGGTGCTGGAGCTGGTTGTACAGGTGCTGCCTGAGGGGGACTGGGAGGTTGCATCGATCCCATCCCGGGTCTTTGGACAGCACCGGTACTGGAGACCGGATACAACTGAGAACCCAATGTTGGCTGCTGATATTGCTCAACATTTCTTAGCACAGGAGGAGTGTGAGGAACAAAAGGTCTCAAAGGAGGTTGTGTAA 1638 0.4444 MGYFSCSAESSISTSTPLPPSSSSFNNIHHFPYSDLVAATNDFSPHNLLGKGTHSHVYKATLRGLPVAIKKPTSPEIANEIDVLSKIHSPHLVNLLGFATDSSPKSEHTLLLVVEFMTNGSLYDLLHSNSDSNPKFLNWGRRIRLALQIAKAIHTLHASTPPIIHRDIKSSNILIDSNFSARLGDFGLAIRAYDSSSFGKLSFKFRSIPPAGTMGYHDPHYVTPECLSTKNDVFSFGVLLLEIMSGRKAIDVTHSPSSILDWAIPLIKRRKVLGVYDPRIGPPKDLVVRKQLGVIAAKCVRSCGERRPEMKDVVGWLSGLCKLEALHYHHSWNHYYGFNFNINVSNPCMMVETYVGKFDGGLMRDSRRVFSDVGFSSNLMELMEKEREVVKVCGGSRFGSGSEKLRFPKAQEFYKWIKFASRKGKLILLNHVKLQMLLKTDDVKEAETAKIVLRAKNQNPAPANIEKGNLVYIYERVLEQLVLELVVQVLPEGDWEVASIPSRVFGQHRYWRPDTTENPMLAADIAQHFLAQEECEEQKVSKEVV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2250 545 Gene3D Phosphorylase Kinase; domain 1 18 116 - -
Sto4g2250 545 Gene3D Transferase(Phosphotransferase) domain 1 117 335 - -
Sto4g2250 545 MobiDBLite consensus disorder prediction 1 20 - -
Sto4g2250 545 SUPERFAMILY Protein kinase-like (PK-like) 24 332 IPR011009 -
Sto4g2250 545 PANTHER OS01G0750732 PROTEIN 1 467 - -
Sto4g2250 545 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Sto4g2250 545 Pfam Protein kinase domain 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2250 545 SMART serkin_6 43 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2250 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Sto4g2250 545 ProSiteProfiles Protein kinase domain profile. 43 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2250 545 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2250 Sto-Chr4 23925740 23934974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2250 31 314 Receptor kinase-like Gene Family AT3G59420 42.230 3.05e-63 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sto4g2250 Pkinase 2.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2250 - - dzi:111304523 435.261