Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2248 ATGAAAGCTTTTGGTGTCATGAATCTTACATTTTGGTGTATCTCCCTAATTCACTTACTTCTATTTTCTTTGTGGTTTCACTTCCAGCCTTGTGATGCTGCTTCTTCACCAACATTATTAGGAAATGAGACTGATCATTTGGCCTTGCTCAAATTCAAAGAATCAATATCCCATGACCCATTTCACATTTTGGCCTCTTGGAATCATTCTACCCACTTCTGTGACTGGTATGGAATCACTTGCAGTCGCAGGCATCAAAGAGTTCAAAGTTTGATATTAGAAGGATATAACTTGCATGGATTCTTATCACCTTACATTGGCAACCTCTCCTTTCTAAGAGCCATTAGTCTCTTGAACAACAGCTTCCACGGAGAAATCCCTCAAGACTTGGGTCGTTTATTCCGATTGCAAAATCTGGTTCTCCAATATAATGCTCTGGTTGGGGAAATTCCTATCAACATCACAAGCTGCTCTCAACTCAGGTACTTGGATTTTGGTGAGAATCATCTTTTTGGCAGGATACCAAAAGAGATTGGTTTTCTCCATAAGCTTGAAAAACTGTATCTTGACCAAAACAATTTAACAGGACAGATTCCATATCCTATGTGGAATCTCTCTTCCTTGAGTCTTATTTCTTTAGCTGCTAATAACCTGGAGGGGAGTATACCAGAAGAAATAGGTCTTTtgaaaaatttgacaaaattggGTTTAGGTCCCaacaatttttttggtaaacttCCTTCTTCTCTTTATAATTTGTCATTCCTCCAAATTCTATCAATTCCATCCAATCATTTCATTGGAACTCTTCCACCAAACATTTTCTTCACCCTCCCTAAGCTCCGACTTTTTGAAGTTGGTGATAACCAAATCtcaggtccaatcccaacctcTACCACAAATGCAACTATGCTTCAAATACTTGATGTTGGTGAAAATAGTTTGACTGGACAAGTTCCAAGTCTAGGAAAGCTACAACATCTTTGGGGGCTATCTTTTGCTAGGAACAATTTAGGCCATAATTCAGCAAGTGACTTTGAGTTTTTAAAATCATTGGCAAACTGCAGTGAGTTGCGTGTGTTTAGTATGGGGTTCAATAATTTTGGAGGTATTTTACCAAATTACATAGGCAATTTGTCCACCAGATTGCAAGAATTATATCTTGATGATAATAAGATATCTGGAAATATTCCTGGATCTATAGGGAATTTGAATAACTTGTTGATATTGAGTATGAATGGCAACTATCTCACACATATCATTCCAACTAGTTTTGGAAAGTTTCAAAGGATGCAGGTGTTAGAATTGGATGGAAACAAATTGTCAGGAGAGATACCATCTATTCTTGGCAACCTCAGTCAATTGTTTCATTTGGACTTATCCTATAATGCTTTTGGAGGAAACATATCTCAAGGTCTTGGAAATTggaaaaacttacaatttttgGACCTTTCACAAAATAATCTCCACGGAGTCATCCCCACAGAGGTTCTTCGTCTCTCTTTTTTATCACTCATTTATTTGAATTTGTCACAAAATTCATTTAGTGGCAACCTTCCTCCTGAGGTtggaaaactaaaaaatatcaataagTTGGATGTGTCTCAAAATTATCTATCTGGTCCAATTCCTGCAACTATTGGAGAATGCCTAGTCTTGGAGTACCTTGATTTAGGTGGGAATTCCTTCCAAGAAATCATCCCTTCTTCTTTGGCTTTATTGAAAGGTCTTCAATATTTAGACCTGTCCCGAAACAACTTGTCCGGTCCAATTCCGAGAGGCCTACAAGATATTTCTATGTTAAAATACTTGAATGTTTCCTTTAACATGTTGGATGGAGAGGTTCCAACCCATGGTGTATTCCATAATGCAAGTGCAATATCTCTTGTTGGTAATAGCAAGCTTTGTGGAGGTATATCAGAGTTAAGGCTACCACCATGCCTTGTCAACGCATTGAATCATAAAAGACACCATAATTTCAAGTCAATAGAACTGATAAGTTTTGGAGTTGCCACTCTCCTTTTTTTATCATCTATTTTTGCTATGTATCATTTGAAGAAAAGGAACAATAAGCCTCCTTTGAATTCATCTACAATCAACCAGCTTCCCAAAGTTTCGTATCAAACTTTACACAATGCGACTCATGGATTCTCAGTCAACAATTTGGTAGGATCTGGAAGTTTTGGCTCTGTCTATAGAGGAAATCTTGAGTCTGAAGAAAATGTTGCTGTAAAGGTTCTTAACCTTCAAAATAAGGGAGCTCACAAGAGTTTCATCGCTGAATGTAATGCACTTAGAAATATCCGGCACCGGAATTTGGTAAAGGTCTTAACATGCTGCTCCGGGATAGATTACAATGGCGATGAATTTAAAGCTATAGTTTTTGAGTATATGGAGAATGGAAGCTTGGAAAAATGGTTGTATCCAAGAATGGAAGATGCAGATATTTCCAGAACTTTTCTCCTCCATCAAagattgaatataattattgatgTTGCTTCTGCATTACATTATCTTCACTATGAATGCGAGCAATCTATCGTTCATTGTGATATAAAGCCGAGCAATGTCCTTCTTGATGGTGACATGGTTGCTCACGTGAGTGATTTTGGCTTAGCAAAACTGCTTCCTAATAAACAAAGTAGCACAATTGGATTACAGGGTACTATTGGCTATGCTCCTCCAgAATATGGAATGGGTTCCATGGTGTCAACAGAAGGTGACATGTATAGTTTTGGAATTCTTATACTAGAGATGTTCACCGGAAGAAAACCGACAGATGAAATGTTTAAAGATGGTCACAATCTTCATAACTATGTCAAGACTACATTTTCGGATCATCTTGTGCAGATAGTTGACCCAAATTTATTCCCCAGATATGATGAAGGAGTATCAACAAATGAGGAAGAAAGTAGGGAGATCCAAACCCTTGTTCATGTTCATTCTAATGTAGAGAAGTGCTTAGTCTCAATTTTGAAGATTGGACTTGCTTGCTCAGTTGAATCTCCAAATGAAAGAATGAGTATAAGAGATGTTAGCAGAGAGCTAGATTTGATCAGAAAGAGCATTCTTGGAGGTGGCCGGATCAATAGAGGTTGA 3099 0.364 MKAFGVMNLTFWCISLIHLLLFSLWFHFQPCDAASSPTLLGNETDHLALLKFKESISHDPFHILASWNHSTHFCDWYGITCSRRHQRVQSLILEGYNLHGFLSPYIGNLSFLRAISLLNNSFHGEIPQDLGRLFRLQNLVLQYNALVGEIPINITSCSQLRYLDFGENHLFGRIPKEIGFLHKLEKLYLDQNNLTGQIPYPMWNLSSLSLISLAANNLEGSIPEEIGLLKNLTKLGLGPNNFFGKLPSSLYNLSFLQILSIPSNHFIGTLPPNIFFTLPKLRLFEVGDNQISGPIPTSTTNATMLQILDVGENSLTGQVPSLGKLQHLWGLSFARNNLGHNSASDFEFLKSLANCSELRVFSMGFNNFGGILPNYIGNLSTRLQELYLDDNKISGNIPGSIGNLNNLLILSMNGNYLTHIIPTSFGKFQRMQVLELDGNKLSGEIPSILGNLSQLFHLDLSYNAFGGNISQGLGNWKNLQFLDLSQNNLHGVIPTEVLRLSFLSLIYLNLSQNSFSGNLPPEVGKLKNINKLDVSQNYLSGPIPATIGECLVLEYLDLGGNSFQEIIPSSLALLKGLQYLDLSRNNLSGPIPRGLQDISMLKYLNVSFNMLDGEVPTHGVFHNASAISLVGNSKLCGGISELRLPPCLVNALNHKRHHNFKSIELISFGVATLLFLSSIFAMYHLKKRNNKPPLNSSTINQLPKVSYQTLHNATHGFSVNNLVGSGSFGSVYRGNLESEENVAVKVLNLQNKGAHKSFIAECNALRNIRHRNLVKVLTCCSGIDYNGDEFKAIVFEYMENGSLEKWLYPRMEDADISRTFLLHQRLNIIIDVASALHYLHYECEQSIVHCDIKPSNVLLDGDMVAHVSDFGLAKLLPNKQSSTIGLQGTIGYAPPEYGMGSMVSTEGDMYSFGILILEMFTGRKPTDEMFKDGHNLHNYVKTTFSDHLVQIVDPNLFPRYDEGVSTNEEESREIQTLVHVHSNVEKCLVSILKIGLACSVESPNERMSIRDVSRELDLIRKSILGGGRINRG 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2248 1032 ProSiteProfiles Leucine-rich repeat profile. 478 499 IPR001611 GO:0005515
Sto4g2248 1032 PANTHER LRR RECEPTOR-LIKE KINASE 30 1024 - -
Sto4g2248 1032 SUPERFAMILY L domain-like 43 338 - -
Sto4g2248 1032 Gene3D Ribonuclease Inhibitor 41 327 IPR032675 -
Sto4g2248 1032 Gene3D Transferase(Phosphotransferase) domain 1 798 1024 - -
Sto4g2248 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Sto4g2248 1032 ProSiteProfiles Protein kinase domain profile. 717 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2248 1032 SMART serkin_6 717 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2248 1032 SUPERFAMILY Protein kinase-like (PK-like) 690 1016 IPR011009 -
Sto4g2248 1032 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
Sto4g2248 1032 PRINTS Leucine-rich repeat signature 479 492 - -
Sto4g2248 1032 PRINTS Leucine-rich repeat signature 574 587 - -
Sto4g2248 1032 Pfam Protein kinase domain 718 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2248 1032 PANTHER OS04G0122200 PROTEIN 30 1024 - -
Sto4g2248 1032 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Sto4g2248 1032 SMART LRR_typ_2 574 597 IPR003591 -
Sto4g2248 1032 SMART LRR_typ_2 133 157 IPR003591 -
Sto4g2248 1032 SMART LRR_typ_2 404 427 IPR003591 -
Sto4g2248 1032 SMART LRR_typ_2 477 500 IPR003591 -
Sto4g2248 1032 SMART LRR_typ_2 205 229 IPR003591 -
Sto4g2248 1032 SMART LRR_typ_2 452 476 IPR003591 -
Sto4g2248 1032 ProSitePatterns Protein kinases ATP-binding region signature. 723 745 IPR017441 GO:0005524
Sto4g2248 1032 SUPERFAMILY L domain-like 353 637 - -
Sto4g2248 1032 Gene3D Ribonuclease Inhibitor 337 647 IPR032675 -
Sto4g2248 1032 Pfam Leucine rich repeat 553 611 IPR001611 GO:0005515
Sto4g2248 1032 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2248 Sto-Chr4 23869454 23872704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2248 42 1028 Receptor kinase-like Gene Family AT3G47570 44.886 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto4g2248 Pkinase 9.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2248 - - gmx:100792724 1125.92