Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2247 ATGAATCCTGCATTCTGGTCTATCTATCTAattcacttgcttcccttttACTTGTGGTTTCACATTCAGCCTTGTGAAGCTGCTTCTTCACCAAAATTATTAGGAAATGAGACTGATCATTTGGCCTTGCTCAAATTCAAAGAATCAATATCCCATCATGACCCATTTCACATTTTGGCATCTTGGAATGATTCTACCCACTTTTGTAATTGGCATGGAATCACTTGCAGCCCCAAGCATCAAAGAGTTCAAAGTTTAATCTTAGAAGGACATAGGTTGCATGGGTTCTTATCACCTCACATTGCCAACCTCTCCTTTCTAAGAGTCCTTAATCTCACCAACAACAACTTCTACGGTGAAATCCCTCAAGACTTGGGTCATTTATTCCGATTgcaaactctctctctctcacataaTACACTGGCTGGGGAAATTCCTGTCAATATCACAAGCTGCTCTCAACTCAGGTACTTAGATTTTAGTGATAATCATCTTATTGGAAGAATACCAAAAGAGATTGGTACTCTTCACAAGCTTGAAATATTGTTACTTAACAAAAACAATTTATCAGGACATATTCCATATTCTATGTGGAATCTCTCTTCCTTGAGTCTGATTGCTTTAAGTTTCAATAACTTGGAGGGGAGTATACCAGAAGAAATAGGACTTTtgaaaaatttgacaaaattggGTTTAGGTGTCAACAAATTTTTCGGTACACTTCCTTCCTCTCTTTACAATTTGTCGTTTCTccaaattctatcaatttcatccaATCATTTCATTGGAACTCTTCCACCAAACATTTTCGTCACCCTCCCTAAACTCGAACTTTTTGAGGTTGGTGATAACCAAATCtcaggtccaatcccaacctcTACCACAAATGCAACTATgcttcaaatacttgattttacTGAAAATAGTTTGAGAGGTCAAGTTCCAAGTCTAGGAAAGCTGCAACATCTTCAGTGGCTTTCCTTTAATCGAAACAATTTAGGTGATAATTCAGCGAGGGACTTGGATTTTTTGAAATCATTGGCCAATTGTAGTATGTTAAGTGACTTTGATATAGGGTTCAATAATTTTGGAGGTCCTTTACCAAATTCCATTGGCAATTTGTCTACCCAATTGCAATACTTATATCTCGAATCTAATAAGATATCTGGAAACATTCCCGAATCAATAGGGAATTTGAACAACTTGTTAGTCTTGCTAATGAGTAGCAACCATCTCACACATATCATTCCAAATAGTTTTGGCAAGTTTCAAATGATGCAAGTATTAGAACTCCATGCAAACGGATTGTCAGGAGAGATACCATCTGTCCTTGGCAACCTCAGTCAATTGTTTCGTTTGGACTTATCCAACAATTCTTTTGAGGGAAACATGTCTCAAGGTCTTGAAAATTGGCAAAAGTTACAATATTTGGACCTTTCACGAAATAATCTTAATGGAGTCATCCCCATAGAGGTTTTTCATCTCTCCTTTTCAACACTTAATTTCTTGAATTTGTCCCATAATTCATTCAGTGGCAATCTCCCCACTGAGGTGGGCAAGCTAAACAATATCAATGTGTTTGATGTCTCTCAAAATCATCTATCTGGTCAAATTCCCGATACCATTAGAGATTGTGTGGTCTTGGGTTACCTTAGCTTAAGTGGGAATTCCTTCCAAGGAACCATCCCTTCATCGTTAGCTTTGTTAAAAGGTCTTCAATCTTTAGACTTGTCAGAGAATAACTTGTCTGGACTAATTCCAGAAGGCTTTCAAAATCTGCCTCTTTTGGAATACTTGAATGTTTCCTTTAACAAGTTAGACGGCGTGGTGCCGAACAAAGGTGTCTTCCGCAATGCAAGTGCAATATCTGTGATTGGTAATAGTAAGCTTTGTGGAGGTATATCAGAATTGCAGCTACCACCATGCCCTACCAAggttatgaaaaataaaagacaccACAATTTCAAGTTGATAGCAATGATAAGTGTTGGGGTTGTAACTTTACTTATATTGTCATCTATTCTTGCTATTTATCGcctgaagaaaagaaacatgaGGCCTCCTTTGTATTTACACCCAATCAATCAGCTTCCCCAAGTTTCATACCAAAGTTTAAGCAATGCAACTAATGGATTCGCAATCCAAAATTTGATAGGATCAGGTAGTTTTGGCTTTGTTTATAAAGGAAGTTTTGAGTCTGGAGAAAATGTTGCTATAAAGGTCCTTAACCTTGAAAATAAGGGAGCTTACAAAAGTTTCATCGCTGAATGTAATGCACTTAGAAATATAAGGCATCGAAATTTGATAAAGGTCTTAACATGTTGCTCTGGCATTGATTACAAGCGCGATGATTTTAAAGCTATAGTTCTTGAGTACATGGAGAATGGAAGCTTAGAAAAATGGTTGTATCCAAGTACATCAAATGCAGATAATCCAATAGCTTTTCTCTTTGATCAAAGATTGGATATAGTTATTGATGTTGCTTCTGCATTACATTATCTTCATTGTGAGTGTGAGCAACCTATCATTCATTGTGATTTAAAGCCGAGCAATATCCTTCTTGATGGTGACATGGTTGCTCATGTGAGTGATTTTGGATTAGCAAGACTGCTCTCTAATAAGCAAAGCAGTACAAGTTTATTACAAGGTACTATTGGCTATGCTCCTCCAGAATATGGAATGGGTTCTCCAGTGTCAACACAAGGAGACGTGTATAGCTTTGGAATTCTTATACTGGAAGTGTTTACCAAAAGAAAACCTACAGATGAAATTTTCAAAGATGGTCAAAATCTTCATAACTATGTTGAGATTGCATTTCCAGATCATCTTGTGCAAAATTTTGACCCGTATTTATTCCCAAGAGCCGAAGGAACAATCATAAATGAGGAAGAAAATGGGGAGATCCAAAGCCTTATTAGTCCCACTATAGAGAAGTGCTTAGTTTCAATCTTGAAGATTGGACTTGCTTGCTCAGTTGAATCACCAAATGAAAGAATGAACATAAGAGACATCACCAGAGAGCTGAATTTGATCAGAAACACCATTCTTACAGGTGGGATCACCTTCAATACATAA 3075 0.3522 MNPAFWSIYLIHLLPFYLWFHIQPCEAASSPKLLGNETDHLALLKFKESISHHDPFHILASWNDSTHFCNWHGITCSPKHQRVQSLILEGHRLHGFLSPHIANLSFLRVLNLTNNNFYGEIPQDLGHLFRLQTLSLSHNTLAGEIPVNITSCSQLRYLDFSDNHLIGRIPKEIGTLHKLEILLLNKNNLSGHIPYSMWNLSSLSLIALSFNNLEGSIPEEIGLLKNLTKLGLGVNKFFGTLPSSLYNLSFLQILSISSNHFIGTLPPNIFVTLPKLELFEVGDNQISGPIPTSTTNATMLQILDFTENSLRGQVPSLGKLQHLQWLSFNRNNLGDNSARDLDFLKSLANCSMLSDFDIGFNNFGGPLPNSIGNLSTQLQYLYLESNKISGNIPESIGNLNNLLVLLMSSNHLTHIIPNSFGKFQMMQVLELHANGLSGEIPSVLGNLSQLFRLDLSNNSFEGNMSQGLENWQKLQYLDLSRNNLNGVIPIEVFHLSFSTLNFLNLSHNSFSGNLPTEVGKLNNINVFDVSQNHLSGQIPDTIRDCVVLGYLSLSGNSFQGTIPSSLALLKGLQSLDLSENNLSGLIPEGFQNLPLLEYLNVSFNKLDGVVPNKGVFRNASAISVIGNSKLCGGISELQLPPCPTKVMKNKRHHNFKLIAMISVGVVTLLILSSILAIYRLKKRNMRPPLYLHPINQLPQVSYQSLSNATNGFAIQNLIGSGSFGFVYKGSFESGENVAIKVLNLENKGAYKSFIAECNALRNIRHRNLIKVLTCCSGIDYKRDDFKAIVLEYMENGSLEKWLYPSTSNADNPIAFLFDQRLDIVIDVASALHYLHCECEQPIIHCDLKPSNILLDGDMVAHVSDFGLARLLSNKQSSTSLLQGTIGYAPPEYGMGSPVSTQGDVYSFGILILEVFTKRKPTDEIFKDGQNLHNYVEIAFPDHLVQNFDPYLFPRAEGTIINEEENGEIQSLISPTIEKCLVSILKIGLACSVESPNERMNIRDITRELNLIRNTILTGGITFNT 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2247 1024 Pfam Protein kinase domain 714 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2247 1024 ProSitePatterns Protein kinases ATP-binding region signature. 718 740 IPR017441 GO:0005524
Sto4g2247 1024 PANTHER OS04G0122200 PROTEIN 24 1016 - -
Sto4g2247 1024 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Sto4g2247 1024 Gene3D Ribonuclease Inhibitor 36 196 IPR032675 -
Sto4g2247 1024 ProSiteProfiles Protein kinase domain profile. 712 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2247 1024 Gene3D Ribonuclease Inhibitor 197 344 IPR032675 -
Sto4g2247 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Sto4g2247 1024 SUPERFAMILY Protein kinase-like (PK-like) 685 1008 IPR011009 -
Sto4g2247 1024 SUPERFAMILY L domain-like 37 333 - -
Sto4g2247 1024 SMART serkin_6 712 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2247 1024 SUPERFAMILY L domain-like 376 632 - -
Sto4g2247 1024 Gene3D Phosphorylase Kinase; domain 1 694 792 - -
Sto4g2247 1024 SMART LRR_typ_2 176 200 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 447 470 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 104 127 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 399 422 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 248 272 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 128 152 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 593 618 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 471 495 IPR003591 -
Sto4g2247 1024 SMART LRR_typ_2 569 592 IPR003591 -
Sto4g2247 1024 Pfam Leucine rich repeat 377 436 IPR001611 GO:0005515
Sto4g2247 1024 Pfam Leucine rich repeat 550 606 IPR001611 GO:0005515
Sto4g2247 1024 PANTHER LRR RECEPTOR-LIKE KINASE 24 1016 - -
Sto4g2247 1024 PRINTS Leucine-rich repeat signature 474 487 - -
Sto4g2247 1024 PRINTS Leucine-rich repeat signature 569 582 - -
Sto4g2247 1024 Gene3D Transferase(Phosphotransferase) domain 1 793 1017 - -
Sto4g2247 1024 Gene3D Ribonuclease Inhibitor 345 644 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2247 Sto-Chr4 23864140 23867360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2247 36 1012 Receptor kinase-like Gene Family AT3G47570 44.132 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto4g2247 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2247 - - gmx:100785561 1126.69