Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2246 TTGGCCTCTTGGAATCATTCTACCCACTTCTGTGACTGGTATGGAATCACTTGCAATCGCAGGCATCAAAGAGTTCAAAGTTTGTTATTGGAAGATCATAGCTTGCGTGGATTCTTATCACCTTACATTGGCAACCTCTCCTTTCTAAGAGCCATTAGTCTCTTAAACAACAGCTTCTACAGAGAAATCCCTCAAGACTTGGGTCGCTTATTCCGATTGCAAAATCTAAGGCTCACGCATAATACATTGGTGGGGGAAATTCCTGTCAACATCACAAGCTGCTCTCAACTCAGGTACTTAGATTTTGGTGAGAATCATCTTAATGGCAGAATACCTAAAGAGATTGGTTCTCTCCACAACCTTGAAATATTGTCTCttgaaaaaaacaatttaacagGACAGATTCCATATTCTATGTGGAATCTCTCTTCTATCACTGTTATTTCCTTAGGTGCTAATAACTTCGAGGGGAGCATAGCAAAAGAAATTGGTCTTTtgaaaaatttgacaaaattggGTTTAGGTCCCAACAATTTTTTGGGCACACTTCCTTCTTCTCTTTATAATTTGTCATTCCTCCAAGTTCTATCAATTGCATCCAATTATTTTATTGGAACTCTTCCACCAAACATTTTCctccctaaactcgaaatttttgaaattggtGGTAACCAAATCTCAGGTCCAGTCCCAACCTCTACCACAAATGCAACTACGCTCCAAATATTTGATATTGGTGAAAATAGTTTGACAGGTCAAGTTCCAATTCTAGACAGGCTACAACATCTTTGGTGGCTAGACTTTTCTGAAAACAATTTAGGTGATAATTCAGCAAAGGACTTGGAGTTTTTGAATTCTTTGACAAATTGTAGTAAGTTGCATGTCTTTACTATGTGGTCCAATAATTTTGGAGGTCCTTTGCCAAATTCCATAGGCAATTTGTCCACTGAATTGCAACAATTATATCTTGGTGATAATAAGATATTTGGAAACATTCCTGAATCTATAGGGAATTTGAATAACTTGATAGTCTTGGTAATGGGCAACAACCATCTAACACATGTCATTCCAACTACTTTTGGCAAGTTTTGGAGGATGCAATCATTACATTTGAATGGAAACAAATTGTCAGGAGAGATACCATCAGCCCTAGGCAACCTCAGTCAATTGTTTGCTTTAGACTTAGCAGATAATGCTTTTAGTGTAAACATATCTCAAGGTATTGGAAATTTACGAATTCTACAATACTTGGATCTTTCACAAAACAAACTTAACGGAGTCATCCCAGCGGAGGTTCTTAGCCTTTCCTCTTTAACACTTCAAATGTTGAATTTGTCACAAAATTCATTCAGTGGCAACCTCCCTACTGAGGTGGGCAAGCTAAAAAATATCAATGGCTTAGATGTCTCTAAAAATTCTCTACATGGTCCAATTACTGGAGCTATTGGAGATTGCTTAGTCTTGGAGTACCTTGATTTAAGCGGGAATTCCTTCCAAGAAATCATCCCTTCTTCTTTGGCTTCGTTAAAAGGTCTTCAATATTTAGACCTGTCTCGAAACAACTTGTCCGGACCAATTCCAAAAGGCCTACAAGATATTTCTTTGTTACAGTACTTGAATGTTTCCTTTAACATGTTGGAAGGCGAGGTTCCGACCCACGGTGTCTTCCATAATGCAAGTGCAATATCTATTGTTGGTAACACTAAGCTTTGTGGAGGTATATCAAAGTTAAAGCTACCGCCATGCCCTGTCAATgcattaaaacataaaagacaacGTAATTTCAAGTTGATAGCACTGATAAGTTTTGGGGTTGCCACTCTCCTTGTTGTATCATCTATTTTTGCTATTTATCATTTGAAGAAAAGGAACAAGAAGCCTCCTTTGAATTCATCTACAATCAACCAGCTTCCCAAAGTTTCGTATCAAACTTTACACAATGCGACTCATGGATTCTCAATCAAAAATTTGATAGGATCAGGAAGTTTTGGCTCTGTCTATAGAGGAAATCTTGAGTCTGAAGAAAATGTTGCTGTAAAGGTTCTTAACCTTCAAAATAAAGGAGCTCACAAGAGTTTCATCGCTGAATGTAATGCACTTAGAAATATCCGGCACCGAAATTTGGTAAAGGTCTTAACATGCTGCTCCGGGATAGATTACAATGGCGATGAATTTAAAGCTATAGTTTTTGAGTACATGGAGAATGGAAGCTTAGAAAATTGGTTGTATCCAAATATGGAAGATGAAGATCATTCCAGAACTTTTCTCCTTGATCaaagattaaatataattattgatgTTGCTTCTGCATTGCATTATCTTCACTACGAATGTGAGCAGCCTATCGTTCATTGTGACATAAAGCCAAGCAATGTCCTTCTTGATGGTGGCATGGTTGCACACGTGAGTGATTTTGGGTTAGCGAAACTACTTCCTAATAAGCAAAGTAGCACAACTGAATTGCGGGGTACTATTGGCTATGCTCCTCCAgAATATGGAATGGGTTCCATGGTGTCAACAGAAGGTGACATGTATAGTTTTGGAATTCTTATACTAGAGATGTTCACCGGAAGAAAACCGACATATGAAATATTTAAAGATGGTCACAATCTTCATAATTCTGTCAAGACTACATTTTCGGACCATCTTGTGCAGATAGTTGACCCAAATTTATTCCCCAGAGATGATGAAGGAGTATCAACAAATGAGGAAGAAAGTAGGGAAATCCAAACCCTTGTTCATGTTCATTCTAATGTGGAGAAGTGCTTAGTCTCAATTTTGAATATTGGACTTGCTTGCTCAGTTGAATCTCCAAATGAAAGAATGAGTATAAGAGATGTTAGCAAAGAGCTAGATTTGATCAGAAAGAGTATTCTTGCAGGTGGTCGGATCAACAGAGGACAAGAATGCCAAAGCTATACATGTCACCTTGTGTTGACACCGGAGAACCCATTCCGTATTCTGAAATGTAATGCAAATTCAATTCTCAAAGAAATAGCAAGAATAGATGACAACAGAAGTAAAGCAGCAACCACAAGACTTACTAGTGCAATCAACTTGAAATTACGGTGTCTTTTGTGTTTCATAACATCGGCAACGCACGATGGTAGCCGCAACTCTAATATACCTCCACAAAGCTTACTATTACCAGTCACGGATATTGCACTTGCATTGCGGAAGACACCTTGGTTTGGCACCTCACCATCTAACTTGTTAAAAGAAACATTCAAGTATTCCAACATAGGCAAATTTTGCAGGCCTTTTGGAATTGGTCCGGACAAGTTATTTCGTGATAGGTCTAAATATCGAAGACCTTTTAACGAAGCCAAGGATGAAGGGATGATTTCTTGGAAGGAATTTCCACTTAAATTAAGGAATTCCAAGACCGTGCAGTCTCCAATAGTTTCAGGAATTTGA 3417 0.372 LASWNHSTHFCDWYGITCNRRHQRVQSLLLEDHSLRGFLSPYIGNLSFLRAISLLNNSFYREIPQDLGRLFRLQNLRLTHNTLVGEIPVNITSCSQLRYLDFGENHLNGRIPKEIGSLHNLEILSLEKNNLTGQIPYSMWNLSSITVISLGANNFEGSIAKEIGLLKNLTKLGLGPNNFLGTLPSSLYNLSFLQVLSIASNYFIGTLPPNIFLPKLEIFEIGGNQISGPVPTSTTNATTLQIFDIGENSLTGQVPILDRLQHLWWLDFSENNLGDNSAKDLEFLNSLTNCSKLHVFTMWSNNFGGPLPNSIGNLSTELQQLYLGDNKIFGNIPESIGNLNNLIVLVMGNNHLTHVIPTTFGKFWRMQSLHLNGNKLSGEIPSALGNLSQLFALDLADNAFSVNISQGIGNLRILQYLDLSQNKLNGVIPAEVLSLSSLTLQMLNLSQNSFSGNLPTEVGKLKNINGLDVSKNSLHGPITGAIGDCLVLEYLDLSGNSFQEIIPSSLASLKGLQYLDLSRNNLSGPIPKGLQDISLLQYLNVSFNMLEGEVPTHGVFHNASAISIVGNTKLCGGISKLKLPPCPVNALKHKRQRNFKLIALISFGVATLLVVSSIFAIYHLKKRNKKPPLNSSTINQLPKVSYQTLHNATHGFSIKNLIGSGSFGSVYRGNLESEENVAVKVLNLQNKGAHKSFIAECNALRNIRHRNLVKVLTCCSGIDYNGDEFKAIVFEYMENGSLENWLYPNMEDEDHSRTFLLDQRLNIIIDVASALHYLHYECEQPIVHCDIKPSNVLLDGGMVAHVSDFGLAKLLPNKQSSTTELRGTIGYAPPEYGMGSMVSTEGDMYSFGILILEMFTGRKPTYEIFKDGHNLHNSVKTTFSDHLVQIVDPNLFPRDDEGVSTNEEESREIQTLVHVHSNVEKCLVSILNIGLACSVESPNERMSIRDVSKELDLIRKSILAGGRINRGQECQSYTCHLVLTPENPFRILKCNANSILKEIARIDDNRSKAATTRLTSAINLKLRCLLCFITSATHDGSRNSNIPPQSLLLPVTDIALALRKTPWFGTSPSNLLKETFKYSNIGKFCRPFGIGPDKLFRDRSKYRRPFNEAKDEGMISWKEFPLKLRNSKTVQSPIVSGI 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2246 1138 PANTHER OS04G0122200 PROTEIN 1 960 - -
Sto4g2246 1138 Pfam Leucine rich repeat 488 546 IPR001611 GO:0005515
Sto4g2246 1138 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Sto4g2246 1138 Gene3D Phosphorylase Kinase; domain 1 632 732 - -
Sto4g2246 1138 Gene3D Transferase(Phosphotransferase) domain 1 733 963 - -
Sto4g2246 1138 SUPERFAMILY Protein kinase-like (PK-like) 625 951 IPR011009 -
Sto4g2246 1138 SMART LRR_sd22_2 315 341 - -
Sto4g2246 1138 SMART LRR_sd22_2 213 239 - -
Sto4g2246 1138 SMART LRR_sd22_2 509 535 - -
Sto4g2246 1138 SMART LRR_sd22_2 118 144 - -
Sto4g2246 1138 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Sto4g2246 1138 SUPERFAMILY L domain-like 318 572 - -
Sto4g2246 1138 SUPERFAMILY L domain-like 5 273 - -
Sto4g2246 1138 SMART serkin_6 652 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2246 1138 PANTHER LRR RECEPTOR-LIKE KINASE 1 960 - -
Sto4g2246 1138 Pfam Leucine rich repeat N-terminal domain 1 19 IPR013210 -
Sto4g2246 1138 SMART LRR_typ_2 339 362 IPR003591 -
Sto4g2246 1138 SMART LRR_typ_2 509 532 IPR003591 -
Sto4g2246 1138 SMART LRR_typ_2 70 94 IPR003591 -
Sto4g2246 1138 SMART LRR_typ_2 118 142 IPR003591 -
Sto4g2246 1138 SMART LRR_typ_2 411 435 IPR003591 -
Sto4g2246 1138 SMART LRR_typ_2 190 214 IPR003591 -
Sto4g2246 1138 Pfam Protein kinase domain 653 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2246 1138 Gene3D Ribonuclease Inhibitor 286 583 IPR032675 -
Sto4g2246 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Sto4g2246 1138 Gene3D Ribonuclease Inhibitor 141 285 IPR032675 -
Sto4g2246 1138 Gene3D Ribonuclease Inhibitor 1 140 IPR032675 -
Sto4g2246 1138 ProSiteProfiles Protein kinase domain profile. 652 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2246 1138 PRINTS Leucine-rich repeat signature 414 427 - -
Sto4g2246 1138 PRINTS Leucine-rich repeat signature 509 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2246 Sto-Chr4 23847693 23858087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2246 1 963 Receptor kinase-like Gene Family AT3G47570 44.614 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto4g2246 Pkinase 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2246 - - gmx:100786600 1096.26