Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2245 ATGAAACCTCTTGCTACCATGAATCTTGCATTTTGGTGTATCTCCCTAATTCACttgcttctcttttctttatggTTCCACTTTCAGCCTTGTGAAGCTGCTTCTTCACCAACATTATTAGGAAATGAGACTGATCATTTGGCATTACTCAAATTCAAAGAATCAATATCCCATGACCCATTTCACATTTTGGCCTCTTGGAATCATTCTACCCACTTTTGTAGCTGGTATGGAATCACTTGCAGCCCCAAGCACCAAAGGGTTCAAAGTTTGATATTACAAGGACATAACTTGCATGGATTCTTACCACCTCACATTGGCAACCTCTCCTTTCTAAGAATCATTAGTCTCTTCAACAATAGCTTCTATGGAGAAATCCCTCAAGCCTTGGGTCATTTATTCCGATTGCAAGATTTGGTTCTCTCAAAGAATACACTGGTGGGGGAAATTCCTGTCAATATCACAAAATGCTCTCAACTCAGGTCCTTATATTTTGGTAATAATCATCTCACTGGTAGAATACCAAAAGAGATTGGTTCTCTACATAAGCTTGAACTATTGGTTCTTGATAAAAACAATTTCACAGGACATATTCCATATTCTTTGTGGAATCTCTCATCCTtgagttttattttttcaaattataataaCTTGGAGGGGAGTATACCACAAGAAATAGGTCTTTTGAAAAATTTGAGAGTATTGGAACTAGCTGTCAACAATCTTTTTGGTACAATTCCTTCTTCTCTTTATAATTTGTCCTCTCTcgaaattctatcaatttcaatcAATCATTTTATTGCAACTCTTCCACCAAACACTTTCCTCAATCTCCCTAGACTCCAACTTTTTTTAGTTGGTGATAACCAAATCtcaggtccaatcccaacctcTATCACAAATGCAACTATGCTTCAAATGGTTGATGTTGGTGATAATAATTTGACAGGTCAAGTTCCAAGTCTAGGAAAGCAACAACATCTTTGGGGGCTATCGCTTTCTCAAAACAATTTAGGTGCTAATTCAGCAAGGGACTTTGAGTTTTTGAAATCATTGGCAAACTGTAGTAAGTTGCGTATCTTGGATATGGGGTTCAATAATTTTGGAGGTCCTTTACCAAATTCCATAGGCAATTTATCCACCAAATTGGAAAATCTATACCTTGGGTATAATAGGATATTTGGAAATATTCCTGGATCTATTGGAAATTTGAATAACTTGATAGTCTTGAGTATGAGTAACAACTGTCTCTCACATACCATTCCAGCTAGTTTTGGCAAGTTTCAAAGAATGCAAGCATTAGATTTGAGTGGAAACAAATTGTCAGGAGAGATACCATCTGTCCTTGGCAACCTTAGTCAATTGTTTCATTTGAATTTATCCAATAATGCCTTTGGAGGAAACATATCTCAAGGTCTTGGAAATTGGCAAAAGTTACAAATTTTAGACCTTTCAAGAAATAATCTTAACGGACTCATCCCCATTGACGTTCTTCGTCTCTCCTTtttaacactcattttcttgaATTTGTCTCAAAATTCATTGAGTGGAAATCTCCCAATTGAGGTGGGCAAGCTAAACAATATCAATGTGCTTGATGTTTCTCAAAATCATCTATCTGGTCAAATTCCTGCAATTATTGGAGATTGCATAATGTTGGAGTACCTTGATTTAGGTGGGAATTCCTTCCAAGAAATCATCCCTTCTTCTTTGGCTTCATTAAAAGGTCTTCAATATTTAGATCTATCCCGAAACAACTTGTCCGGACCAATTCCAAAAGGCCTGCAAGATATTTCTATGTTAAAATACTTGAATGTTTCCTTTAACATGTTGGAAGGTGAGGTTCCAGCCCATGGTGTCTTCCATAATGCAAGTGCAATATCTCTTGTTGGTAATAGTAAGCTTTGTGGAGGTATATCAGAGTTAAAGCTACCACAATGCCCTGTCAATGCTTTGAATCATAAAAGACACCGTAATTTCAAGTTGATAACACTGATAAGTTTTGGGGCTGCCATTCTACTTTTTTTATCATCAATTTTTGCTATGTATCATTTGAAGAAAAGGAACAAGAAACTTCCTTTGAATTCATCTACAATCAACCAGCTTCCCAAAGTGTCGTATCAAAGTTTACACAATGCGACTCATGGATTCTCGGTCAACAATTTGATAGGATCAGGAAGTTTTGGCTCTGTCTACAGAGGAAGTCTTGATTCTGAAGAAAATGTTGCTGTGAAGGTTCTTAACCTTCAAAATAAAGGAGCTCACAAGAGTTTCATCATTGAATGTAATGCACTTAGAAATATCCGGCACCGAAATTTGGTAAAGGTCTTAACATGTTGCTCAGGGATAGATTACAATGGTGATGAATTTAAAGCTATAGTTTTTGAGTACATGGAGAATGGAGGCTTAGAAAGCTGGTTATATCCAAGTATGAAAGATGCAGATCTTTCTAGAACTTTCCTCCTTGATCAAagattgaatataattattgatgTTGCTTCTGCATTACATTATCTTCATTATGAATGTGAGCAATCTATCGTTCATTGTGATATAAAGCCGAGCAATGTCCTTCTTGATGGTGACATGGTTGCTCACGTGAGTGATTTTGGCTTAGCAAAACTGCTTCCTAATATGCAAAGTAGCACAACTGGATTACAGGGTACTATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCCATGGTGTCAACAGAAGGTGACATGTATAGTTTTGGAATTCTCATACTGGAGATGCTCACCGGAAGAAAATCGACAGATGAAATGTTTAAAGATAGTCACAATCTTCATAACTATGTCAAGACTACATTTTCGGACCATCTTGTGCAGATAGTTGACCCAAATTTATTCCCCAGAGATGATGAAGGAGTATCAAGAAATAATGAGGAAGAAAACAGGGAGATCCAAACCCTTGTTCATGTTCATTCTAATGTGAAGAAGTGCTTAGTCTCAATTTTGAAGATTGGACTTGCTTGCTCAGTTGAATCTCCAAATGAAAGAATGAGTATAAGAGATGTTTGCAGAGAGCTAGATTTGATCAGAAAGAGCATTCTTGCAGGTGGCCGGATCAATAGAGGTTGA 3102 0.3575 MKPLATMNLAFWCISLIHLLLFSLWFHFQPCEAASSPTLLGNETDHLALLKFKESISHDPFHILASWNHSTHFCSWYGITCSPKHQRVQSLILQGHNLHGFLPPHIGNLSFLRIISLFNNSFYGEIPQALGHLFRLQDLVLSKNTLVGEIPVNITKCSQLRSLYFGNNHLTGRIPKEIGSLHKLELLVLDKNNFTGHIPYSLWNLSSLSFIFSNYNNLEGSIPQEIGLLKNLRVLELAVNNLFGTIPSSLYNLSSLEILSISINHFIATLPPNTFLNLPRLQLFLVGDNQISGPIPTSITNATMLQMVDVGDNNLTGQVPSLGKQQHLWGLSLSQNNLGANSARDFEFLKSLANCSKLRILDMGFNNFGGPLPNSIGNLSTKLENLYLGYNRIFGNIPGSIGNLNNLIVLSMSNNCLSHTIPASFGKFQRMQALDLSGNKLSGEIPSVLGNLSQLFHLNLSNNAFGGNISQGLGNWQKLQILDLSRNNLNGLIPIDVLRLSFLTLIFLNLSQNSLSGNLPIEVGKLNNINVLDVSQNHLSGQIPAIIGDCIMLEYLDLGGNSFQEIIPSSLASLKGLQYLDLSRNNLSGPIPKGLQDISMLKYLNVSFNMLEGEVPAHGVFHNASAISLVGNSKLCGGISELKLPQCPVNALNHKRHRNFKLITLISFGAAILLFLSSIFAMYHLKKRNKKLPLNSSTINQLPKVSYQSLHNATHGFSVNNLIGSGSFGSVYRGSLDSEENVAVKVLNLQNKGAHKSFIIECNALRNIRHRNLVKVLTCCSGIDYNGDEFKAIVFEYMENGGLESWLYPSMKDADLSRTFLLDQRLNIIIDVASALHYLHYECEQSIVHCDIKPSNVLLDGDMVAHVSDFGLAKLLPNMQSSTTGLQGTIGYAPPEYGMGSMVSTEGDMYSFGILILEMLTGRKSTDEMFKDSHNLHNYVKTTFSDHLVQIVDPNLFPRDDEGVSRNNEEENREIQTLVHVHSNVKKCLVSILKIGLACSVESPNERMSIRDVCRELDLIRKSILAGGRINRG 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2245 1033 Pfam Leucine Rich Repeat 357 379 IPR001611 GO:0005515
Sto4g2245 1033 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Sto4g2245 1033 Pfam Leucine rich repeat 553 611 IPR001611 GO:0005515
Sto4g2245 1033 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515
Sto4g2245 1033 ProSiteProfiles Protein kinase domain profile. 717 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2245 1033 SUPERFAMILY L domain-like 381 637 - -
Sto4g2245 1033 Gene3D Ribonuclease Inhibitor 349 649 IPR032675 -
Sto4g2245 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Sto4g2245 1033 SUPERFAMILY L domain-like 43 338 - -
Sto4g2245 1033 SMART LRR_sd22_2 428 454 - -
Sto4g2245 1033 SMART LRR_sd22_2 574 600 - -
Sto4g2245 1033 SMART LRR_sd22_2 229 255 - -
Sto4g2245 1033 SMART LRR_sd22_2 380 406 - -
Sto4g2245 1033 SMART LRR_sd22_2 476 497 - -
Sto4g2245 1033 Gene3D Ribonuclease Inhibitor 41 191 IPR032675 -
Sto4g2245 1033 PANTHER LRR RECEPTOR-LIKE KINASE 30 1025 - -
Sto4g2245 1033 SUPERFAMILY Protein kinase-like (PK-like) 691 1017 IPR011009 -
Sto4g2245 1033 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
Sto4g2245 1033 PANTHER OS04G0122200 PROTEIN 30 1025 - -
Sto4g2245 1033 PRINTS Leucine-rich repeat signature 479 492 - -
Sto4g2245 1033 PRINTS Leucine-rich repeat signature 574 587 - -
Sto4g2245 1033 Gene3D Ribonuclease Inhibitor 192 348 IPR032675 -
Sto4g2245 1033 SMART LRR_typ_2 229 252 IPR003591 -
Sto4g2245 1033 SMART LRR_typ_2 253 277 IPR003591 -
Sto4g2245 1033 SMART LRR_typ_2 452 476 IPR003591 -
Sto4g2245 1033 SMART LRR_typ_2 404 427 IPR003591 -
Sto4g2245 1033 SMART LRR_typ_2 574 597 IPR003591 -
Sto4g2245 1033 SMART LRR_typ_2 181 205 IPR003591 -
Sto4g2245 1033 Pfam Protein kinase domain 718 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2245 1033 Gene3D Transferase(Phosphotransferase) domain 1 798 1026 - -
Sto4g2245 1033 ProSiteProfiles Leucine-rich repeat profile. 478 499 IPR001611 GO:0005515
Sto4g2245 1033 ProSitePatterns Protein kinases ATP-binding region signature. 723 745 IPR017441 GO:0005524
Sto4g2245 1033 SMART serkin_6 717 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2245 Sto-Chr4 23838182 23841420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2245 42 1029 Receptor kinase-like Gene Family AT3G47570 44.687 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto4g2245 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2245 - - gmx:100792724 1145.57