LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto4g2238	ATGGACAAGAGTGAGTTTAAAGCAAAAGAGATGAATATGATGAAGAATCTTGATGAAGAAGAGGGATTATtaatgaaagagaaagataGGATTTGGAAGCTTCCAGGGCAGCCTAAGGTTAGGTTTTCACAATATGGAGGATATGTGAGTGTGGATGAAGAAGCAGGACGAGCTTTCTTCTATTATTTTGTTCAAGCTCAACGTAATAAGGATTCTTTGCCTCTCCTTATTTGGCTCAATGGAGGACCAGGATGCTCATCTCTTGCATATGGAGCAATGCAAGAGCTTGGACCCTTCAGAGTGAATAGCGATGGCAAAACACTTTTCAAAAACAGATATCCATGGAACTATTTTGCAAATGTGTTGTTCGTGGAGTCACCAGCAGGCGTAGGATTCTCATACTCAAACACATCCTCAGATTACAACACCAACGGCGACAAAAAAACCGCCGCTGATAACTATGCATTCTTGGTGAATTGGTTAAAGAGATTTCCTGAATATAAAAGCAGAGATCTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTTCCTCAATTTGCCCACACTATTCTTCAACACAACACTCTTCCCAACAATACTTTCATCAACCTCAAAGGAATCATGATAGGGAACGCAGTGATAAACGACGAGACAGACACGAGAGGAATGTACGAGTTTCTGGGAAGCCACGCCATAATCTCCGATTCAACAGTGAAAGCCATCGAAAAATTTTGTGATCTTTCACCAAACGCGACGGAACAAGGCAAAGAGTGTAATGCAGCAATAGACGAAGCAGGCGAAGATGTTGGCAACATTGATATCTACAACATCTATGGCCCTCTGTGCATGAATCCAAATCTCACTGCCACTCCCAAACCCAACTCTATCATAATTGATCCTTGTAGTGACTATTATGTAAGTGCATATCTAAACCGGGATGATGTCCAAAAGGCCCTTCATGCCAATGTGACCAAACTCAAGTATGAGTGGTCACCTTGTAGTGATGTCATCACAAAATGGAATGATAGCCCATCAACCATCCTTCCTCTTCTACAAGAATTCCTCAATcatgggcttagggtttggattttcaGTGGTGATGTAGATGGAAGAGTGCCTGTTACTTCAACACTTTACTCAATTAACAATATGAATTTAGAGGTCACAACTCCATGGCATCCTTGGTTCTTCAATGGAGAGGTTGGTGGTTACACACAAGTATATAAGGGAAACCTAACATTTGCCACAGTGAGAGGAGCAGGGCATCAAGTTCCAAGCTTCCAACCAGCCAGAGCCCTTTCACTCATCAAACACTTCTTAGATGGCACATCTCTTCCCAATACAAAAAGATACTATTag	1362	0.4053	MDKSEFKAKEMNMMKNLDEEEGLLMKEKDRIWKLPGQPKVRFSQYGGYVSVDEEAGRAFFYYFVQAQRNKDSLPLLIWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLFKNRYPWNYFANVLFVESPAGVGFSYSNTSSDYNTNGDKKTAADNYAFLVNWLKRFPEYKSRDLYITGESYAGHYVPQFAHTILQHNTLPNNTFINLKGIMIGNAVINDETDTRGMYEFLGSHAIISDSTVKAIEKFCDLSPNATEQGKECNAAIDEAGEDVGNIDIYNIYGPLCMNPNLTATPKPNSIIIDPCSDYYVSAYLNRDDVQKALHANVTKLKYEWSPCSDVITKWNDSPSTILPLLQEFLNHGLRVWIFSGDVDGRVPVTSTLYSINNMNLEVTTPWHPWFFNGEVGGYTQVYKGNLTFATVRGAGHQVPSFQPARALSLIKHFLDGTSLPNTKRYY	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto4g2238	453	Gene3D	alpha/beta hydrolase	25	285	IPR029058	-
	Sto4g2238	453	SUPERFAMILY	alpha/beta-Hydrolases	27	446	IPR029058	-
	Sto4g2238	453	ProSitePatterns	Serine carboxypeptidases, serine active site.	174	181	IPR018202	GO:0004185
	Sto4g2238	453	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	23	447	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	111	123	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	124	134	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	160	185	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	413	426	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	Gene3D	-	348	443	-	-
	Sto4g2238	453	ProSitePatterns	Serine carboxypeptidases, histidine active site.	413	430	IPR033124	GO:0004185
	Sto4g2238	453	Pfam	Serine carboxypeptidase	36	443	IPR001563	GO:0004185\|GO:0006508
	Sto4g2238	453	Gene3D	-	302	339	-	-
	Sto4g2238	453	PANTHER	CARBOXYPEPTIDASE	23	447	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto4g2238	Sto-Chr4	23766282	23776082	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto4g2238	310	446	Calmodulin-binding Proteins	AT2G22960	29.927	1.54e-15	72.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto4g2238	K16297		-	cit:102613184	672.159