Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2232 ATGCATGGGCACTTGCAAGAGATCCCAAGCTATGGTATGATGCTGATTGCTGAGAGATTCATACCTAAGAAGTTGCATGACACATCTCTTGATTTCAGAGGGACCAACTTTGAGTACATCCCTTTTGggtcgagaaggagaatgtgtCCAGGCATGTCATTTGCTTTACCAAACATAGAGTTTACTCTTGCTCGCTTACTCTACCACTTTGACTGGGAACTCTCAAATCAAATGAAACCACAAGACTTGGATATGACTGAATATTTTGGAGGGCCATGGAAGTTACCTCTGTTAGGGAATTTGCACCAGCTAGCAAGTGCAGGATTACTTCCACACCACACTTTGAAACTACTAGCAGAGAAGTATGGACCTCTAATGCACCTACAACTAGGTGAAATTTCTGCATTGGTTGTATCATCCCCCGAGATGGCCAAAGAGATCATGAAAACACATGATCTTACTTTTGCACAGAGACCAAAACTTGTTAGCTCCAAAATCATGTTCTACGAGTCAACAGATATTGCTTTTGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATGCATGTTAGAACTTTTAAGTGCCAAGCGGGTTCAGTCTTTCTCGTTTATTCGAGAAGATGAGGTAAGAAAACTCGTAGAATCAATTCGGATGTGTGCAGGTTTACCAATCAATCTTACTACAAGAGTTTTCTCTATGGTAAGTACATCGGTTTGCAGGGCAGCATTTGGTAAGAAATCTGAAGATGCAGATGAGTTACTATGTTTGCTCAAGCAAACAATAGAATTGTCAGGAGGATTTGATCTGGCTGATTTGTTTCCTTCACTGAAGCTTATTCATCTCATAACTCCAATGGaatacaaattgaaaaagatgcAAAAGAAGCAGGATAGGATCTTAGAAAGGATTGTCAATGAGCATAAAGTAAGGAAGATTACCGCAAAAGAAGGCAAGGGTGAGTCAGGAGAAGATAACCTTGTCGATGTTCTCTTACGAGTCCAACAAAGTGGCGAACTCAAGATACCTGTCACTGACAATAACATCAAAGCTGTGATTTGGGACATGTTTGGTGCTGGAACTGATACTTCTGCTTCAGTGATAGAATGGGTCATGTCTGAGCTGATGAGAAACCCAAGAGTAAGAGAAAAGGCACAAGCTGAAATAAGACAAGTTTTCAAGGGAAAGAAAACAATCCATGAGACTGATCTGGAACAACTTAGTTACTTGAAGTTAGTGATCAAAGAAACCTTGAGGTTGCATCCACCACTTCCCTTGTTGCTTTCAAGAGAATGCAGGGAAAGCTGCAATATTGGTGGGTATTTCATACCCATCAAAACTAAAGTCCTAATTAATGCATGGGCACTTGGAAGAGATTCCAAGCTATGGTATGATGCTGAGAGCTTCATACCAGAGAGGTTCAATGATACATCTCTTGATTTTAGAGGAACCAATTTTGAGTACATTCCTTTTGGATCAGGAAGGAGAATGTGTCCTGGCATTTCATTTGCATTACCCAGTATGGAGCTTCCTTTGGCTCAGTTACTTTACCACTTCAACTGGGAACTCCCAAATGGAATGAAACCAGAAGAGTTGGATATGACTGAATATTTTGGAATTGCAGTTGGAAGGAAAAACAACCTGTACTTGATTCCCACTATGTATAATCCTTCAGAATAA 1683 0.3945 MHGHLQEIPSYGMMLIAERFIPKKLHDTSLDFRGTNFEYIPFGSRRRMCPGMSFALPNIEFTLARLLYHFDWELSNQMKPQDLDMTEYFGGPWKLPLLGNLHQLASAGLLPHHTLKLLAEKYGPLMHLQLGEISALVVSSPEMAKEIMKTHDLTFAQRPKLVSSKIMFYESTDIAFAPYGDYWRQMRKICMLELLSAKRVQSFSFIREDEVRKLVESIRMCAGLPINLTTRVFSMVSTSVCRAAFGKKSEDADELLCLLKQTIELSGGFDLADLFPSLKLIHLITPMEYKLKKMQKKQDRILERIVNEHKVRKITAKEGKGESGEDNLVDVLLRVQQSGELKIPVTDNNIKAVIWDMFGAGTDTSASVIEWVMSELMRNPRVREKAQAEIRQVFKGKKTIHETDLEQLSYLKLVIKETLRLHPPLPLLLSRECRESCNIGGYFIPIKTKVLINAWALGRDSKLWYDAESFIPERFNDTSLDFRGTNFEYIPFGSGRRMCPGISFALPSMELPLAQLLYHFNWELPNGMKPEELDMTEYFGIAVGRKNNLYLIPTMYNPSE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2232 560 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS P450 superfamily signature 499 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Sto4g2232 560 Gene3D Cytochrome P450 89 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 Pfam Cytochrome P450 18 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 Pfam Cytochrome P450 91 548 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PANTHER CYTOCHROME P450 71D8 17 90 - -
Sto4g2232 560 PANTHER CYTOCHROME P450 71D8 91 557 - -
Sto4g2232 560 SUPERFAMILY Cytochrome P450 91 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 SUPERFAMILY Cytochrome P450 18 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 Gene3D Cytochrome P450 16 88 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 143 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 453 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto4g2232 560 PANTHER OS08G0105600 PROTEIN 91 557 - -
Sto4g2232 560 PANTHER OS08G0105600 PROTEIN 17 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2232 Sto-Chr4 23705427 23708322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2232 18 97 Cytochrome P450 AT5G25120 46.341 3.31e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2232 - K15472 gmx:100794503 692.96