Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2216 ATGGCGGAACCTCGCCCTAAGCGTCCTAAAATCGCCAGGGGGGAAGATGATTATATGCCGGGGAACATTATTGAGATTGAGCTTCATAAGTTCATGACCTTTGATTACTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTCATTGGGCCGAATGGTTCTGGGAAGAGCTCTCTTGTATGTGCCATTGCACTTGGCCTCGGTGGGGAGCCTCAGCTGTTAGGGAGAGCAACAAGTATTGGCTCATATGTGAAGCGTGGAGAAGATTCTGGTTACATTAAGATAACACTGAGAGGGGATGGAAATGAGGAGCATATCACCCTTGTCCGGAAAATAAATACTAACAATAAACTGCTTGATTTTAACTTTGATAAAAGATGGTCAAAGTGGTTGGTTAAGGATTTTGAACCTGAGACTGTGTACTGA 426 0.4366 MAEPRPKRPKIARGEDDYMPGNIIEIELHKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEDSGYIKITLRGDGNEEHITLVRKINTNNKLLDFNFDKRWSKWLVKDFEPETVY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2216 141 Pfam AAA domain 26 114 IPR038729 GO:0140664
Sto4g2216 141 CDD ABC_SMC5_euk 21 103 - -
Sto4g2216 141 Gene3D - 22 129 IPR027417 -
Sto4g2216 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 120 IPR027417 -
Sto4g2216 141 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 17 131 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2216 1 117 Structural Maintenance of Chromosomes family AT5G15920 78.632 1.85e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2216 K22803 - gmx:100778678 208.379