Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2205 ATGAAGAGGTTGAGGTCCAGCGACGATCTCCATTCGTACGGAGACAAAAATGTTTGTAAGGATTCGAATCTGAATCGATCCTCGTCCTCTTCGCACAGAAGCTTTTACTACAAACCGGATAATGTGCGGAAGGGATTGCCTTCTTCGTCGTCTTCTGCGTCTCGGTATGACAGGGATCGAACTGTGGATGAGGAGCGCGAGGGTTCCAGGTTGGTTCGGAAGCGATCAGACCATGACTTTGAGAGTTTTGACCGGAGGAAGGGGTTTGATCGTTACAGGGACAGCGCGGATGGTCGAGGGTATAGGTCGGAGAGTTTTTGTGGGTCTAGGAGGGATTTTCCAAAGCGCTTTCGGTCTGAGAGAGATCGGTCTCGGCGGGAAGGAAGCGTGTCTTCGTGGCGGAGATTTGGAGgtggcttgaaggattttgaaGAAAATAGAGTAGTACGGTCTCCAAAGGGTTTGAGGGATGTGAAATCTCCGACGTGGTCAAAAGATTCTGAGAGTGAGCAGTCTAAGATGAGGTCTCCTCCTAGAGGGTCAAGAGATGCTACGTCAAAGTCGAAGTCACCATCATGGTCCAAGGATTCAGAGAGTGAACAATCAAAGAGTGAGCAGTCAAAGAGTGTTGAGGTGAAGAAAACTGAAGAGTTGCAGGTTGAGAGTCGTAGTAGTAGTGAAATGGAAGAAGGAGAGCTGGAACCTGAACCCATGCCTGAAACTGAACCAGAGACTGCTCCTAAAGTTGCACATGCGAACGGAAAGGAAGTCCAGACTGAAAACCAGCTCAATGATACAGATACTACTGTGCCTGATAGATCAGAAGAATCAAATAAGGAAGAGACAAAACCAAATGGGGACACCAATTCTGGGGAAAAGAATGTGGGGAAAGAAGATGATAAGCAGCCAGATGTTCTGAATGATCCAAATGATAAAATGCatgaaaacaaaaaggaaattaGAACTGTAGATCGTGATGATAACAAGGAAGAAGAGAGTTTGAAGGTTGATACTGAATTTAAGGAGGAAACAAAGGAAGGTGCAGATCTGGAGAAGCCATTGTTTTACAAAGAGGAGCATGAGCAGGACAAGGGTGTAGATCTTGTAACCAGGGCAGACTCTGACAAACCTGAGCCAAATGAGGAAGTTTCAACAGGAAATGAAGTGCACAAAACAGATGGAGAAACGGAGATGGATACTGTGACCAACAATGTGAAGGATAAAGGCAAAAGTGTCTCTGTTGCACCTAGTGATGTTGTTCATTCTTCTGATGATGGTATGTGGAATGATAGAGGATTGAGAGATCTTGCAACATGCTCCGATGATCCAATGGAAGGACCGAGCACAAGGGGCTTTGAATTGTTTTCCAGATCTCCTGTCAGAAAGGTGGAGAAAACTGACCCATCAGGTCTCAACAAGCAGAAAGATGGAAGCCTTTCAATGGAGGAGCTTGATCTTTCTCTTAGCTTGCCAAATGTTTTGTTACCTATTGGTGCTCAAGAGACTACCCCAGTCCCTGGATCCCCCAGTCAAGCACGTAGTGTGCAGTCTTTAAGTACTACATTTCGTACCAACTCAGAGGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTCTATCACAATCCTAGCTGTTCTCTGACACAAAATTCATTGGACTTTGAGCAATCAGTTGGTAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGTTGGCAAGGCCAGTCTCAGAATGATCCCAAGCAGAAGGAAATTCCACTTTGTCAAGGAACTATGATGAATGGAAATGGCACTTTTGGCCAGTCTCAGGCAACATGGGGCATTTTAGATGGTCAAGCTGTGAAAGGTCAACATTCTAGGCTTATAGAAGGGAGCTCAAAAATGGCAAGTGGACTTGATAGGCAATTGAGTTTTCATAAGCAGTTGTCAGGACAGTCCAGGCGCCATGATGATGTTAGATCTCCTTCTCAGAGTGTTGGGTCTCATGACATTGGGTCAAGTTATAGTTTTGACAAGAAGAGGGAAATGAGAGACAGGAGTAGTGGTAATCTTCATCGAACTGCCAGCCAAAAGGAACAAGAACAATTTCAAATGGGTGGAATTGAGTTTGTTGAGACAATTATTGCAAGAATAGTTTCTGAACCAGTGCATACAATGGCTAAAAAGTTTCATGAAATGACTGGACAGTCGGTGGCATGTTTGAAAGAGAGCATTCGTGAGATTATGCTAAATGCAGATAAGCGTGGGCAAGTACTTGCTTTTCAGAAAGTTCTGCAGAGCAGGTCTGATATAACCTTGGAGGTCCTACAAAAGTCCCACCGTCTTCAATTGGAAATTTTGGTTTCTTTAAAAACTGGTTTAGTTAATTTTCTTCAGCTAGACAACACCATTTCATCTTCTGATTTAGCTGAGATTTTCCTCAACTTGAGATGTAGGAATCTTTTATGCCGAAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGTGCAAAAAGATGGCTTTTGCAGGGATTGTATGTGTCTTGTGTGTCTTAAATTTGACAATGCATCAAATACTTGTAGTTGGGTTGGGTGTGATGTTTGTCTTCATTGGTGCCATACGGATTGTGGATTACGCGAATCTTATATTAGAAATGGACACAGTGCCACTGGAGCACAAGGGGTGACTGAAATGCAGTTTCACTGTATTGCCTGTGATCACCCCTCTGAAATGTTTGGTTTTGTGAAGGAGGTGTTTCTCAATTTTGCAAAAGATTGGTCAGTTGAAGCCTTTTGCAAGGAGCTTGAATATGTGAAGAGAATTTTCTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGAGATTGCTGATCAAATGCTTCTAAGGTTGATAAATAAGTCAAACCTTAAAGATGTTTACAGCCACATCATGTCATTCCTTGCTGATGGTGATTCTTCCAAAGTAGCCACGACACAGAATTTTTCTGGGAaggaaataattaaagaaaagaaaggggtaGCTGGGCCAAGCCAGGAAGCTGCCTGGATGAAATCTGTTTATTCAGAGAAAATGCCTCTTTTAGAAAGGCCAGCAAACATCCTTCCTAGCTATGACCGGAATGATAAACGGACTCCAGCACAAGAGTTGCAGATGAATGTCCAAAAGGACTTTTGTTTCGATGAATTGGAGAGTATCGTTAAAATTAAACAGGCAGAGGCTAAAATGTTTCAGACACGTGCTGATGATGCCAGAAGAGAAGCCGAAGGTCTGAAACGCATTGCTCTTGCAAAGAACGAGAAAATCGAAGAAGAGTATGCCAGCCGTCTTTCGAAGTTGCAATTAGCAGAGGCTGAGGAAATGCGAAAACAAAAATTTGAAGAACTCCAGGCGTTGGAAAGAGCACATCTGGAGTACTTCAATATGAAAAGGAGAATGGAAGTGGACATTAAAGATCTGTTATTGAAAATGGAAGCTACAAAAAGAAGCCTTGCCATGTGA 3501 0.4267 MKRLRSSDDLHSYGDKNVCKDSNLNRSSSSSHRSFYYKPDNVRKGLPSSSSSASRYDRDRTVDEEREGSRLVRKRSDHDFESFDRRKGFDRYRDSADGRGYRSESFCGSRRDFPKRFRSERDRSRREGSVSSWRRFGGGLKDFEENRVVRSPKGLRDVKSPTWSKDSESEQSKMRSPPRGSRDATSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEELQVESRSSSEMEEGELEPEPMPETEPETAPKVAHANGKEVQTENQLNDTDTTVPDRSEESNKEETKPNGDTNSGEKNVGKEDDKQPDVLNDPNDKMHENKKEIRTVDRDDNKEEESLKVDTEFKEETKEGADLEKPLFYKEEHEQDKGVDLVTRADSDKPEPNEEVSTGNEVHKTDGETEMDTVTNNVKDKGKSVSVAPSDVVHSSDDGMWNDRGLRDLATCSDDPMEGPSTRGFELFSRSPVRKVEKTDPSGLNKQKDGSLSMEELDLSLSLPNVLLPIGAQETTPVPGSPSQARSVQSLSTTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSLDFEQSVGSRPLFQGIDQVSHGGWQGQSQNDPKQKEIPLCQGTMMNGNGTFGQSQATWGILDGQAVKGQHSRLIEGSSKMASGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRSSGNLHRTASQKEQEQFQMGGIEFVETIIARIVSEPVHTMAKKFHEMTGQSVACLKESIREIMLNADKRGQVLAFQKVLQSRSDITLEVLQKSHRLQLEILVSLKTGLVNFLQLDNTISSSDLAEIFLNLRCRNLLCRSQLPVDECDCKVCVQKDGFCRDCMCLVCLKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGAQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEAFCKELEYVKRIFSASKDMRGRQLHEIADQMLLRLINKSNLKDVYSHIMSFLADGDSSKVATTQNFSGKEIIKEKKGVAGPSQEAAWMKSVYSEKMPLLERPANILPSYDRNDKRTPAQELQMNVQKDFCFDELESIVKIKQAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYASRLSKLQLAEAEEMRKQKFEELQALERAHLEYFNMKRRMEVDIKDLLLKMEATKRSLAM 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2205 1166 MobiDBLite consensus disorder prediction 56 77 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 573 588 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 138 182 - -
Sto4g2205 1166 Pfam Coiled-coil region of Oberon 1039 1154 IPR032535 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 727 749 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 766 781 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 781 796 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 807 828 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 853 873 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 926 945 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1061 1081 IPR004082 -
Sto4g2205 1166 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1100 1122 IPR004082 -
Sto4g2205 1166 Pfam PHD - plant homeodomain finger protein 816 939 IPR032881 -
Sto4g2205 1166 PANTHER PROTEIN OBERON 4 1 1166 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 1 16 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 18 36 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 90 130 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 1 77 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 193 230 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 499 519 - -
Sto4g2205 1166 Coils Coil 1085 1135 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 672 690 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 90 431 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 568 588 - -
Sto4g2205 1166 CDD PHD_OBE1_like 846 905 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 269 404 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 645 700 - -
Sto4g2205 1166 MobiDBLite consensus disorder prediction 503 519 - -
Sto4g2205 1166 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1166 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2205 Sto-Chr4 23467197 23471438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2205 816 964 PHD Gene Family AT5G57380 27.517 5.01e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2205 - - gmx:100817003 1525.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2205 4 23467197 23471438 Sto4g2205 4 23467197 23471438 ECH