Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2202 ATGGAGGAAGTTCAGGAATCTCAAACTCAATCAATAGATCAAGATCAAAATGAAGTAATTACTGAAAGTTCTGCATTTGTTAAAGGGGAACCTCCACAAGAGAGCAATCCCCCTAAAGTTGACTCTGAGGTTGAAATCCTTCACGAAAAAGtaacaaaacaaataattaaggaAGGCCATGGTCAGAAACCCATGAAGTATTCAACATGCTTTTTTCACTACAGAGCATGGACTGAAAGCACACAGCACAAGTTCGAAGACACATGGGAGGAGCAACGACCTATTGAAATGGTATTAGGAAAAGagaagaaagaaatgacTGGCTTGGCTATTGGTGTGGCCAACATGAAAGCTGGTGAGCGTGCCTTACTGCGTGTGGGCTGGGTATTAGGATATggagaggaaggaagctttTCTTTTCCAAATGTTCCACCCATGGCAGATTTAATTTATGAAGTCGAACTCATAGGCTTTGATGAGACAAAAGAAGGAAAAGCTCGTAGTGATATGACTGTGGAGGAAAGGATTGGTGCAGCAGATCGGAGAAAGATGGATGGAAATGATTTGTTTAAGGAAGAAAAACTGGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAACTGTTTGGGAAGTATAGGGACATGGCTTTGTCTGTAAAGAATCCATGCCACCTTAACATGGCTGCATGTTTGATAAAGTTGAACCGTTTTGATGAAGCCATAGGACAATGTAGCATTGTATTGTCTGAGGATGAAAACAATGTTAAGGCATTATTTAGGCGAGGGAAAGCTAAGGCAGCACTAGGGCAAACAGATGGTGCCAGGGAAGATTTTCTGAAGGCAAGGAAGTATGCGCCTGAAGATAAAGCAATAGCAAAAGAATTGCGGTTGCTTGCTGAACAGGACAAGGCTCTTTATCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGGCCTGAACCAAAACCTAAGCAAAGTAACTTGCTGATTCTCATTTGGCAGTGGTTGCTGTCAATATTTCATCGCCTCATTGTGTTGTTCAAGCGTGAAAGGCAAAAATCTGACTAA 1101 0.396 MEEVQESQTQSIDQDQNEVITESSAFVKGEPPQESNPPKVDSEVEILHEKVTKQIIKEGHGQKPMKYSTCFFHYRAWTESTQHKFEDTWEEQRPIEMVLGKEKKEMTGLAIGVANMKAGERALLRVGWVLGYGEEGSFSFPNVPPMADLIYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNDLFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALSVKNPCHLNMAACLIKLNRFDEAIGQCSIVLSEDENNVKALFRRGKAKAALGQTDGAREDFLKARKYAPEDKAIAKELRLLAEQDKALYQKQKEIYKGIFGPRPEPKPKQSNLLILIWQWLLSIFHRLIVLFKRERQKSD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2202 366 ProSiteProfiles TPR repeat profile. 264 297 IPR019734 GO:0005515
Sto4g2202 366 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 30 327 - -
Sto4g2202 366 MobiDBLite consensus disorder prediction 1 41 - -
Sto4g2202 366 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 64 156 IPR001179 GO:0003755
Sto4g2202 366 Gene3D - 35 160 IPR046357 GO:0003755
Sto4g2202 366 SMART tpr_5 230 263 IPR019734 GO:0005515
Sto4g2202 366 SMART tpr_5 179 212 IPR019734 GO:0005515
Sto4g2202 366 SMART tpr_5 264 297 IPR019734 GO:0005515
Sto4g2202 366 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 67 159 IPR001179 GO:0003755
Sto4g2202 366 SUPERFAMILY FKBP-like 42 158 - -
Sto4g2202 366 MobiDBLite consensus disorder prediction 1 23 - -
Sto4g2202 366 Gene3D Tetratricopeptide repeat domain 161 292 IPR011990 GO:0005515
Sto4g2202 366 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 30 327 - -
Sto4g2202 366 SUPERFAMILY TPR-like 171 323 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2202 Sto-Chr4 23447444 23451773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2202 50 332 Calmodulin-binding Proteins AT5G48570 32.056 1.46e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2202 - - gmx:100790587 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2202 4 23447444 23451773 Sto4g2202 4 23447444 23451773 ECH