Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto4g2183 | ATGTCCGATATTATGGCACTCTTATCTTttagagttgttgaaaaatCTACGTTTCCTGAAGTCTTTCATAACGTGCCCTTACAACACCACAATTTCATAGACGACATAGAGAATTTCAATGTCAAATTCTGTGTCCAATTTGAATTTCATCGTCTCTCCGGTGACATTCAGCCACTCTCCATTCCCTCGACTCCGATCTCCTCCCATTATGTTTCTTGTGCACATTTTTTCCGAGACGGTACATCTTTCTTGCGAAGCAACCTATACCATCCACTATTTACCGATGAAGCTCTCGACGATTTGATACCTATGATTATGTCCGATGCGGAACTATTATTTGGCTTTCAAACTTGTGGTCGCTCTTATGTTGGGGAATGTCCTGTTGTGTACTCTATGGCTGTGGAAGTTTTCGTTGAAATACCGGAGACCGAAGAGATTGCGAGGGAAATTAGGCTTGCGTGGGAGTTtgagcaacaaatacaaatgaTTCCTGCTTCCGAGGAAGCCATACGGTTGCTTAAGGTTCAAGAATATGTTCATAATTGCGAGAATCAGTGTTGCTGCTGCATTTGTCTCGAAGATTTACGCGACAGCAAACAGGTTGCGACAATGCCGTGTCGTCATGTTTTCCACAATGATTGCATTGTGGAGTGGCTAAAAAAAAGTCATGTGTGTCCGCTGTGTCGTTACTCGATGTCTACTGACTTAGATATTTAG | 717 | 0.4086 | MSDIMALLSFRVVEKSTFPEVFHNVPLQHHNFIDDIENFNVKFCVQFEFHRLSGDIQPLSIPSTPISSHYVSCAHFFRDGTSFLRSNLYHPLFTDEALDDLIPMIMSDAELLFGFQTCGRSYVGECPVVYSMAVEVFVEIPETEEIAREIRLAWEFEQQIQMIPASEEAIRLLKVQEYVHNCENQCCCCICLEDLRDSKQVATMPCRHVFHNDCIVEWLKKSHVCPLCRYSMSTDLDI | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto4g2183 | 238 | ProSiteProfiles | Zinc finger RING-type profile. | 188 | 229 | IPR001841 | - | |
Sto4g2183 | 238 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 235 | IPR013083 | - | |
Sto4g2183 | 238 | SUPERFAMILY | RING/U-box | 175 | 235 | - | - | |
Sto4g2183 | 238 | Pfam | Ring finger domain | 188 | 229 | IPR001841 | - | |
Sto4g2183 | 238 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 148 | 232 | - | - | |
Sto4g2183 | 238 | SMART | ring_2 | 188 | 228 | IPR001841 | - | |
Sto4g2183 | 238 | PANTHER | F6A14.12 PROTEIN-RELATED | 148 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto4g2183 | Sto-Chr4 | 23277957 | 23278673 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto4g2183 | 155 | 235 | C3H Transcription Factor Family | AT5G60820 | 37.209 | 6.80e-15 | 71.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto4g2183 | - | - | aprc:113870408 | 100.523 |