Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto4g2173 | ATGGGGGAAAAAGAAGAACTTGGTGTGGTTTCTGGATACCCTTTGGAAAGATTAAACAAGGGTCAGTATTGGATTCCCACACCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCTTGCCCCGTCTGCTCCAAGACTTTCAATAGATACAACAATCTCCAGATGCACATGTGGGGGCATGGGTCTCAATACAGGAAAGGGCCAGACTCCCTGAGAGGGACACAGCCCACAGCAATGCTGAGGCTGCCATGCTTCTGCTGTGCACAAGGGTGCAAGCACAACATAGAGCACCCAAGGGCAAGGCCCTTGAAGGACTTTAGGACCCTCCAAACCCACTACAAGAGGAAGCATGGCATCAAGCCCTATTGCTGCACCAAGTGTGGGAAGCCCTTTGCTGTGAAGGGAGATTGGAGGACTCATGAGAAGAACTGTGGCAAGATATGGTTCTGCCTCTGTGGATCTGATTTCAAACACAAGAGGTCACTCAAGGATCACATTAAGGCATTTGGTCACTCCCATGCACCTTTTCTAcctaatcatcatcatcatcatcaggaaGAAGATGTTGAAGCAGCTTCTGATGTTGAACAAGATGGggataattaa | 606 | 0.4604 | MGEKEELGVVSGYPLERLNKGQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLRGTQPTAMLRLPCFCCAQGCKHNIEHPRARPLKDFRTLQTHYKRKHGIKPYCCTKCGKPFAVKGDWRTHEKNCGKIWFCLCGSDFKHKRSLKDHIKAFGHSHAPFLPNHHHHHQEEDVEAASDVEQDGDN | 201 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto4g2173 | 201 | Pfam | Zinc finger, C2H2 type | 38 | 57 | IPR013087 | - | |
Sto4g2173 | 201 | PANTHER | ZINC FINGER PROTEIN WIP2 | 14 | 197 | - | - | |
Sto4g2173 | 201 | SMART | c2h2final6 | 148 | 171 | IPR013087 | - | |
Sto4g2173 | 201 | SMART | c2h2final6 | 122 | 142 | IPR013087 | - | |
Sto4g2173 | 201 | SMART | c2h2final6 | 38 | 60 | IPR013087 | - | |
Sto4g2173 | 201 | MobiDBLite | consensus disorder prediction | 177 | 201 | - | - | |
Sto4g2173 | 201 | PANTHER | ZINC FINGER PROTEIN WIP2 | 14 | 197 | IPR043584 | GO:0003700|GO:0010468 | |
Sto4g2173 | 201 | SUPERFAMILY | beta-beta-alpha zinc fingers | 32 | 60 | IPR036236 | - | |
Sto4g2173 | 201 | Gene3D | Classic Zinc Finger | 37 | 60 | - | - | |
Sto4g2173 | 201 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 38 | 65 | IPR013087 | - | |
Sto4g2173 | 201 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 40 | 60 | IPR013087 | - | |
Sto4g2173 | 201 | Gene3D | Classic Zinc Finger | 100 | 175 | - | - | |
Sto4g2173 | 201 | SUPERFAMILY | beta-beta-alpha zinc fingers | 107 | 142 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto4g2173 | Sto-Chr4 | 23116799 | 23119676 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto4g2173 | 3 | 197 | C2H2 Transcription Factor Family | AT3G57670 | 74.872 | 3.53e-109 | 316 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Sto4g2173 | zf-C2H2 | 0.00029 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto4g2173 | - | - | gmx:100794446 | 358.607 |