Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2155 ATGGTGGAGAAGACGGCGAAAGGGAGGAAGGAGGAGGTCGTTACCAGAGAGTACACCATCAACCTCCACAAGCGCCTTCATGGATGCACATTCAAGAAGAAGGCTCCAAAAGCAATTAAGGAAATTAGGAAGTTTGCCCAAAAGGCAATGGGAACAACTGATGTGAGAGTGGATGTCAAGCTTAACAAGCATATCTGGAGTGGTGGAATCCGCAGTGTCCCAAGGAGAGTTCGTGTTCGCGTAGCAAGAAAAAGAAACGACGAAGAAGATGCTAAGGAAGAGTTTTACTCATTAGTCACTGTTGTAGACATCCCCAGAGAAGAGTTGAAAGGTTTGGGCACCAAGGTTATTGATGAAGAGGATTAG 366 0.459 MVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSGGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVVDIPREELKGLGTKVIDEED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2155 121 PANTHER 60S RIBOSOMAL PROTEIN L31 1 121 IPR000054 GO:0003735|GO:0005840|GO:0006412
Sto4g2155 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Sto4g2155 121 Gene3D - 10 121 IPR023621 -
Sto4g2155 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Sto4g2155 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Sto4g2155 121 PANTHER 60S RIBOSOMAL PROTEIN L31 1 121 - -
Sto4g2155 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2155 Sto-Chr4 22963390 22964655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2155 7 121 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 83.478 2.55e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2155 K02910 - pvy:116116185 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2155 4 22963390 22964655 Sto4g2155 4 22963390 22964655 ECH