Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2135 ATGGACAAAGGAGTGCCTCCTAGTCTCTTTGTTAATGATGGTTCTTTCATGGAGAAGTTCAAGCAACTTCAACAAGAACAGGAAAAGGACACGAATGCCAAATTAGTGGAGTCTAAACCAATTAAAATTGTTTCAGGGTCTTTGATTCCTAATACCTCCATTAGAAAAAACTCCATTGACTCTAAGGCTAACGATACAAAGAAAACTCAGGCTGGTTCTGGTGGCAAACTTGCTTTTAGTTTAAAACAGAAGACTAAATTAGTTCCACCACCtgttaagttaagtgctgaagaggatgaagaagaaaggGATGCTGGTGATGTGCCATCAAAACGGCTGAAGTTGGAACATGAGGGTCGCACTAAGCAAACTTCAAGACAACTTGAAGTTGCACCTCTTTCTCCAAGTGACCCTACAGTGAAGAAAGTTGCTGATAAACTAGCAAGTTTTGTGGCTAAGAATGGAAGGCAATTTGAGGATGTTACGCGTCAAAAAAATCCGGGAGATACACCTTTTAAATTTTTGTTTGACGAGAAATGCGCTGACTACAAATATTATCAATATCGGCTTGCTCAAGAGGAGAAGGTTCTTTCACAGTCAAGGGAATCAAATATATCTACTAATGaactATATGCAGGTAGTACAAGCACTTCATCTTCCAGATCAACAATTGGCTCTCAGAGAACATCTCAGCAGCATTCAACTTTCCAAATTCCTGCATCTGCTTTATATGAAAGTACTGtctttttaaacaCTTCCCATGGAGAAGGTGTGCTactactattatttatttattttatgtatgCCATGTGCATATCTGTTGTAGATGAGCCTGGTGCATTATCAAAAGCTGATTCATTAGCACGAATGGAGTTCTTCATGAAGAAAGCTGCACAGGAAGAGAAGATGAGACAACCTAAGCAGTCGAAAGATGAGATGCCTCCACCTGCTTCTCTTCAAGATACTGGAAAAAAGGGTCGTCACATGGGTGATTACATTCCCCCAGAAGAACTTGAGAAGTTCTTGGCTAGCTGTAATGATGCAGCAGCACAGAGAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGCCACAAGCTCTTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGTGGCTCCAGAAAGGGTATTTCAGATCCAATAATGGCAGGCAATGTTAAGATGAATAACTTGGGAGTTGGTGCTCAGCATCCAGGTGAGGTCACTCCAGACGACGACATATACGAGCAGTACAAGAAGCGGATGATGCTCGGATATCGTTACAGACCCAACCCTCTGAACAATCCTCGCAAAGCTTATTATTGA 1347 0.4009 MDKGVPPSLFVNDGSFMEKFKQLQQEQEKDTNAKLVESKPIKIVSGSLIPNTSIRKNSIDSKANDTKKTQAGSGGKLAFSLKQKTKLVPPPVKLSAEEDEEERDAGDVPSKRLKLEHEGRTKQTSRQLEVAPLSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYQYRLAQEEKVLSQSRESNISTNELYAGSTSTSSSRSTIGSQRTSQQHSTFQIPASALYESTVFLNTSHGEGVLLLLFIYFMYAMCISVVDEPGALSKADSLARMEFFMKKAAQEEKMRQPKQSKDEMPPPASLQDTGKKGRHMGDYIPPEELEKFLASCNDAAAQRAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKMNNLGVGAQHPGEVTPDDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2135 448 MobiDBLite consensus disorder prediction 208 231 - -
Sto4g2135 448 Pfam G-patch domain 366 409 IPR000467 GO:0003676
Sto4g2135 448 MobiDBLite consensus disorder prediction 55 73 - -
Sto4g2135 448 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 448 IPR040169 -
Sto4g2135 448 Gene3D Surp module 116 199 IPR035967 GO:0003723|GO:0006396
Sto4g2135 448 MobiDBLite consensus disorder prediction 298 327 - -
Sto4g2135 448 MobiDBLite consensus disorder prediction 55 76 - -
Sto4g2135 448 ProSiteProfiles G-patch domain profile. 365 412 IPR000467 GO:0003676
Sto4g2135 448 ProSiteProfiles SURP motif repeat profile. 143 186 IPR000061 GO:0003723|GO:0006396
Sto4g2135 448 Pfam Surp module 142 192 IPR000061 GO:0003723|GO:0006396
Sto4g2135 448 MobiDBLite consensus disorder prediction 89 139 - -
Sto4g2135 448 SMART surpneu2 141 195 IPR000061 GO:0003723|GO:0006396
Sto4g2135 448 SMART G-patch_5 363 410 IPR000467 GO:0003676
Sto4g2135 448 MobiDBLite consensus disorder prediction 93 124 - -
Sto4g2135 448 SUPERFAMILY Surp module (SWAP domain) 124 198 IPR035967 GO:0003723|GO:0006396
Sto4g2135 448 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2135 Sto-Chr4 22819808 22824583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2135 354 410 C2H2 Transcription Factor Family AT5G26610 45.614 2.19e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2135 K13096 - gmx:100786213 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2135 4 22819808 22824583 Sto4g2135 4 22819808 22824583 ECH