Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2122 ATGCAGCCTAGGATTACAATCATGAAACGACCTCGTGTTCCATCAGCAACACACACGcctcaacctCATCCTCAAATTCATCCTCAACAAGTCCCTATTCCTAGCCGTGATGATGGAGACTACAATCTCAAGGACACCAATCCACAACTCGGTGAGAGATGGCCAAATAGTGGAAGAGGGTGGATGAATGGTGGTGGTGAAAGGTACACAAGCACATATGACCTTGTTGAGCAGATGTTCTATCTCTATGTCCGAGTTGTAAAAGCCAAAGATCTTCCTGCCGGTGCACTCACCGCGAGCTGTGATCCTTATGTGGAAGTGAAGCTGGGGAACTACAGAGGAAGAACAAAGCATTTTGAGAAGAAGATGAATCCAGAATGGAACCAAGTCTTTTCTTTCTCCAAAGATCGTATTCAGTCCTCTATTCTAGAGGTCTTTGTGAAAGATAAAGACATGGTGGGCAGAGATGAATACCTTGGAAGGGTGGTTTTTGACCTCAATGAGGTTCCAACCAGAGTTCCACCAGATAGTCCACTGGCTCCTCAATGGTACAGACTCGAGGACCGGCGAGGCGAAGGGAAAGTAAGAGGCGAAATCATGCTTGCAGTATGGATGGGAACTCAAGCTGATGAAGCATTTCCAGAAGCTTGGCATTCTGATGCTGCTTCTGTTTCTGGAGAAGGTGTTTTCAATATCAGATCAAAGGTTTATGTTTCACCAAAATTATGGTATCTTAGAGTCAATGTGATTGAAGCTCAAGATGTGATACCCGGTGACAGAAACCGCCTACCTGAAGTTTTTGTAAAAGCTCAGGTGGGAAATCAAGTACTGAGGACAAAGATTTGCCCAACTAGAACAACCACTCCACTTTGGAATGAAGATTTGATCTTTGTGGCAGCTGAACCATTTGAGGAGCAACTGATGATCACAGTGGAGGATCACGTCCACCCTTCGAGGGACGAAGTGCTCGGGAAGATAGCCTTGCCATTGACCCTCTTTGAGAAGAGGTTAGACCACCGGCCGGTCCATTCTCGTTGGTTCAATCTTGAGAAGTATGGTTTTGGAGTAATGGAAGGTGATAGAAGGAATGAGCTCAAGTTTTCAAGCAGGATTCACCTAAGAGTCTGCCTTGAAGGTGGATACCATGTGCTAGATGAATCCACTATGTACATTAGTGATCAAAGACCTACAGCAAGACAGCTATGGAAGCAACCCATTGGGATACTTGAAGTGGGTATTCTAGGGGCACAAGGGCTTCTCCCAATGAAGATGAAGGATGGTCGTGGAAGCACTGATGCTTATTGTGTTGCAAAGTATGGCCAGAAATGGGTCAGAACAAGAACAATCCTTGATACTTTTAGTCCCAAATGGAATGAACAATACACCTGGGAGGTTTATGATCCTTGCACTGTGATCACACTGGGAGTCTTTGACAATTGCCATTTGGGTGGTGGAGGTGGTGAGAAAGGTCAAGGAGCACGCGATTCGCGAATCGGGAAGGTACGAATTCGGCTTTCGACACTGGAGGCTCATAGAATCTACACTCATTCTTACCCACTTCTTGTTCTGCACCCACATGGAGTCAAGAAGATGGGTGAGCTTCAACTAGCAGTGAGGTTCACCACCCTCTCACTAGCCAACATGGTTTACATCTATGGCCATCCCTTGCTTCCCAAGATGCATTACTTACATCCTTTCACAGTGAACCAAGTAGAGAACTTGAGGTACCAAGCCATGAACATAGTAGCCGTGAGGCTCGGCCGAGCCGAACCATCATTGAGGAAGGAGGTGGTGGAGTACATGCTAGATGTTGATTCCCACATGTGGAGCATGAGAAGAAGCAAGGCCAATTTCTTCCGCATAATGTCCCTCTTCTCTGGTATGATCACAATGGGAAGATGGTTCAGTGATGTTGGACACTGGAAGAACCCCATCACAACTATTTTGGTTCACATCCTTTTTCTGATACTCATTTGGTACCCAGAATTGATCCTCCCAACTCTGTTCCTCTACATGTTCTTGATCGGTCTCTGGAACTACCGGTTTCGGCCGAGACACCCGCCCAACATGGATACGAAGCTCTCCTGGGCAGAAGCAGTACACCCGGATGAACTTGATGAGGAGTTTGACACTTTCCCAACTTCCAGATCGCTTGATGTTGTGAGAATGAGGTATGATAGGCTTAGAAGTGTTGCTGGTAGGATTCAAACTGTGGTTGGGGATATAGCTACACAGGGTGAGAGGTTTCAGAATTTGCTGAGCTGGAGGGACCCACGAGCTACTAGCCTCTTTGTGGTGTTTAGCTTTGGTGCAGCAGTGGTGCTGTATGCTACGCCATTCAGAATGGTGGCTCTAGTCACTGGTTTGTATTGCCTGCGCCACCCAAGGTTTAGGAGCAAGATGCCCTCTGTTCCAAGCAATTTCTTCAAGAGACTTCCTGCTCGCACAGATAGTTTATTGTAA 2463 0.4637 MQPRITIMKRPRVPSATHTPQPHPQIHPQQVPIPSRDDGDYNLKDTNPQLGERWPNSGRGWMNGGGERYTSTYDLVEQMFYLYVRVVKAKDLPAGALTASCDPYVEVKLGNYRGRTKHFEKKMNPEWNQVFSFSKDRIQSSILEVFVKDKDMVGRDEYLGRVVFDLNEVPTRVPPDSPLAPQWYRLEDRRGEGKVRGEIMLAVWMGTQADEAFPEAWHSDAASVSGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPGDRNRLPEVFVKAQVGNQVLRTKICPTRTTTPLWNEDLIFVAAEPFEEQLMITVEDHVHPSRDEVLGKIALPLTLFEKRLDHRPVHSRWFNLEKYGFGVMEGDRRNELKFSSRIHLRVCLEGGYHVLDESTMYISDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDGRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGGGEKGQGARDSRIGKVRIRLSTLEAHRIYTHSYPLLVLHPHGVKKMGELQLAVRFTTLSLANMVYIYGHPLLPKMHYLHPFTVNQVENLRYQAMNIVAVRLGRAEPSLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGMITMGRWFSDVGHWKNPITTILVHILFLILIWYPELILPTLFLYMFLIGLWNYRFRPRHPPNMDTKLSWAEAVHPDELDEEFDTFPTSRSLDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQNLLSWRDPRATSLFVVFSFGAAVVLYATPFRMVALVTGLYCLRHPRFRSKMPSVPSNFFKRLPARTDSLL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2122 820 ProSiteProfiles C2 domain profile. 63 184 IPR000008 -
Sto4g2122 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 243 398 IPR035892 -
Sto4g2122 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 81 220 IPR035892 -
Sto4g2122 820 SMART C2_3c 244 344 IPR000008 -
Sto4g2122 820 SMART C2_3c 81 178 IPR000008 -
Sto4g2122 820 SMART C2_3c 408 517 IPR000008 -
Sto4g2122 820 CDD C2C_MCTP_PRT_plant 244 396 - -
Sto4g2122 820 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 30 820 - -
Sto4g2122 820 CDD C2D_MCTP_PRT_plant 408 537 - -
Sto4g2122 820 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 30 820 - -
Sto4g2122 820 CDD C2B_MCTP_PRT_plant 81 207 - -
Sto4g2122 820 Pfam Plant phosphoribosyltransferase C-terminal 665 820 IPR013583 -
Sto4g2122 820 Gene3D C2 domain 231 376 IPR035892 -
Sto4g2122 820 Gene3D C2 domain 387 544 IPR035892 -
Sto4g2122 820 Gene3D C2 domain 77 224 IPR035892 -
Sto4g2122 820 ProSiteProfiles C2 domain profile. 385 518 IPR000008 -
Sto4g2122 820 ProSiteProfiles C2 domain profile. 224 347 IPR000008 -
Sto4g2122 820 Pfam C2 domain 81 184 IPR000008 -
Sto4g2122 820 Pfam C2 domain 243 349 IPR000008 -
Sto4g2122 820 Pfam C2 domain 407 520 IPR000008 -
Sto4g2122 820 MobiDBLite consensus disorder prediction 1 58 - -
Sto4g2122 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 407 542 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2122 Sto-Chr4 22701043 22703559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2122 14 820 Lipid Metabolism Gene Families AT5G48060 76.173 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2122 - - lang:109333614 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2899 13 34152897 34155221 Sto4g2122 4 22701043 22703559 ECH
Sto4g2122 4 22701043 22703559 Sto4g2122 4 22701043 22703559 ECH