Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2121 atggcGCCGAAGCAGAGGACACCCAGAGTCTCCAGAAACCCTGAATTGATCAGGGGAATTGGTAGGTACTCGAGGTCCAAGATGTACCACAAGAGGGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTCCCTCGCCACGATCCCAAGCCTAAGCCGGAAGCTCCCGCAGCGAAGCCCCCCAAGTTCTACCCTGCTGATGATGTCAAGAGGCCTCTCGTCAACAAGCACAAGCCGAAGCCCACGAAGCTCAGGGCCAGCATTACTCCAGGGACAGTGTTGATCCTTCTTGCTGGGAGATTCAAGGGGAAGAGAGTAGTCTTCCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTCACTGGTCCATTTAAGATAAATGGTGTTCCTTTGAGACGTGTCTGTCAGTCTTATGTCATTGGGACATCCACCAAGGTTGATATCTCTGGAGTTAATGTGGACAAGTTTGATGACAAATACTTCGGCAAGCCGgttgagaaaaagaagaaaaagacagAGGGCGAATTTTTTGAGGCAGAGAAGGAGGAGAAAAATGTGATCCCTCAAGAGAAAAAGGACGACCAAAAAGTTGTGGACACTGCATTGCTAAAAGCCATTGAGAGTGTTCCAGAGTTGAAGGCTTACTTGGGTGCTAGGTTTTCTCTTCAGGCTGGCATGAAGCCTCATGAGCTAGTCTTTTAA 702 0.4772 MAPKQRTPRVSRNPELIRGIGRYSRSKMYHKRGLWAIKAKNGGVFPRHDPKPKPEAPAAKPPKFYPADDVKRPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVCQSYVIGTSTKVDISGVNVDKFDDKYFGKPVEKKKKKTEGEFFEAEKEEKNVIPQEKKDDQKVVDTALLKAIESVPELKAYLGARFSLQAGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2121 233 SUPERFAMILY Translation proteins SH3-like domain 87 178 IPR008991 -
Sto4g2121 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 - -
Sto4g2121 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sto4g2121 233 CDD KOW_RPL6 81 233 IPR041997 -
Sto4g2121 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Sto4g2121 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sto4g2121 233 Gene3D - 87 171 IPR014722 -
Sto4g2121 233 MobiDBLite consensus disorder prediction 41 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2121 Sto-Chr4 22698577 22700158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2121 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.262 2.62e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2121 K02934 - pvy:116113922 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2121 4 22698577 22700158 Sto4g2121 4 22698577 22700158 ECH