Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2115 atgaAGCCTTTTGCTATCATATTTCCCTTTTGGACCATTTGCTTTCATCTCTTAATTACTTCAAATCCACCATGGAaagcttcttctttttcttcttcttgtgcaTTAGGAAATAATAATGAGAGTGATCATTTGGGTCTTCTCAAATtcaggcaatcaatatccaTTGACCCTTATGGCATCTTGGCCTCTTGGAATGATTCTATCCACTTTTGCAATTGGCATGGCATCACTTGCAAGGATATTAATGGCCACCAAAGGGTTACTAAATTGAGGTTAGAAGGATATGACTTGCATGGACTCATATCACCATACATTAGCAACCTCACTTTTCTTGGAAGCATCATACTTTGGAACAATAGCTTCTATGGACAAATCCCACAAGAGTTGGGTGGTTTATCTCATCTCCAAACACTTTATCTCACCAATAATTCATTGATCGGGGAAATTCCTATCAACTTGACGAGTTGTTACCAACTCAGGCACTTATGCATTGATGGGAATAATCTCATGGGCAGAATACCTATGGAGATTGGCTCTCTTCAAAAACTTGAAGAATTGTATTTTTCTGCAAACAATTTAACCGGAAAAATCCCAACTTCTATGTGGAATCTTTCTTCTCTTAAAGTCATTTCTTTGGCTTTTAATAACTTGGAGGGGAATTTACCACAAGAAGTTGGTGGGCTGAAACACTTGAAAGTACTAGTGGTTGCTGCAAACAAACTTTTTGGGACACTTCCTTCTTCTCTTTACAATTTGTCATCTCTCACAGACATTGAAGCTTCCTTCAATCATTTTAATGGCTCAATCCCACCCAACATATTCCAAACCCTCCCAAATCTCCAAGTATTGCGCATTGCTTCGAATCAAATCTCAGGTCCTTTCCCAAGTTTCCTTTCGAATGCATCTGTGCTTCGAATACTCGACATTTCTGGTAACCATTTTGTTggacaatttcaaattttagggaGGAAGCCAGAAAATCTAAGTGAGTTGGATGTTTTGGATATAGGCTATAACAATTTTGGTGGTCCTTTGTCTCATTTCATAGGAAATTTGTCTACCAAACTCACTCAATTATTTCTTGGGGGCAATCAAATCTTTGGGAAACTTCCTACAACTATAGGAAATCTTGTCAATTTGATTGTCTTGGGTTTGGAAGATAATCATTTTATTGGGATCATCCCATCTAGTTTTGGCAAGTTTCAAAAGATGCAAGCATTATATTTGTATAGAAACAAATTTTCAGGAAAAATTCCCACTTGCATAGGCAACCTCAATCAATTGTATACACTAGACCTAGCAATGAATTTGTTTGAAGGAGAAATTCCTTCAAGTATTGGGAATTGCCAAAATTTGAATATACTATATCTTTCAGAGAACAACCTTAGTGGACCTATACCTTTAGGGGTATTTAGCCTTTTCTCTTTGGTATTCTTGAACTTATCACACAACTCACTAAGTGGCATCCTTCCTGTCGAGGTAGGAAAGCTAAAAAATATCGATCATTTGGATCTATCGAAAAATCGTTTGTCCGGTGACATTCCCGAAACAATTGGAGATTGCATGAGTTTGGAGTACATTATTTTGCGGGGCAATTCCTTCCATGGAATCATCCCTTCAACTTTCGCTTCATTAAAAGGCCTTTTGTATTTAGACTTGTCAGAAAACAACTTGTCCGGATCAATTCCAGAAGCGTTGCAAAGTATTCCTGTTTTAGAATACTTGAATGTTTCTTTTAACATGTTGGATGGCATGGTGCCACACAAAGGCATTTTTGGCCAAGCAAGTTCAATATCAATTCTTGGAAATAGTGAGCTTTGTGGAGGTatttcaaagttaaaattaCCACCATGCCCTATCAAGGTtaccaaaaggaaaaaacacCACAGTCTCATGGGAATTATTGTTGAATTTGAAGAAGTTGTTGCTATAAAGATCTTTAATCTTCAAAAGAAGGGTGCTCATAAAAGTTTCATGTCCGAATGCAATGCACTTAAAAATATCAGGCATAGAAACTTGGTAAAGATTTTAACGTGTTGCTCAAGCATAAACGATGAAGGTCATGATTTTAAAGCTCTGGTTTTTGAGTACATGTCAAATGGAAGCTTAGAGAAATGGTTGCATCCTGCAATAGGAAATACTGAACATCAAACAAATTATCTCCTTCATCAAAGACTAGATATTATTGTTGATGTTGCTTCTGCATTACATTATCTTCACTATGAGTGCGAACAACCTGTCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGAGAACATGGTCGCTCGTTTAACTGATTTTGGATTAGCTAGATTGCTCTCAAAATGTAGCTTCTCCCGTGAGCAATCTAGCACCATTGGAATAAAAGGGACTATTGGCTACACTCCTCCAGAATATGGAATGGGTTCTAATGCATCAATAGAAGGTGACGTGTATAGCTTTGGAATTCTTGTTTTGGAAATGTTAACAAGAAGAAGACCTACAGAAGAAATGTTTAAAGATGGACATAATCTCCATAATTATGTTAAAGCTTCATTTCCCAATAAGCTTTTGCAGATAGTGGATGAAGCTATTTTCCCTAGAGGATCAAATCAAACAATGGAATCAACAGAAGATGGCTATTTGGAAAACATGACAATAAACAATCCTAATATAGAGAAATGGTTAATTTCACTATTTAGGATTGGACTTGCTTGTTCAGTTGATTCACCGAAAGAAAGAATGAATATGATTGATGTTAGAAGGGAGCTAAATTCATTGAAAAGTTCCTTTTTACTTTGGTGGAATTAA 2802 0.3533 MKPFAIIFPFWTICFHLLITSNPPWKASSFSSSCALGNNNESDHLGLLKFRQSISIDPYGILASWNDSIHFCNWHGITCKDINGHQRVTKLRLEGYDLHGLISPYISNLTFLGSIILWNNSFYGQIPQELGGLSHLQTLYLTNNSLIGEIPINLTSCYQLRHLCIDGNNLMGRIPMEIGSLQKLEELYFSANNLTGKIPTSMWNLSSLKVISLAFNNLEGNLPQEVGGLKHLKVLVVAANKLFGTLPSSLYNLSSLTDIEASFNHFNGSIPPNIFQTLPNLQVLRIASNQISGPFPSFLSNASVLRILDISGNHFVGQFQILGRKPENLSELDVLDIGYNNFGGPLSHFIGNLSTKLTQLFLGGNQIFGKLPTTIGNLVNLIVLGLEDNHFIGIIPSSFGKFQKMQALYLYRNKFSGKIPTCIGNLNQLYTLDLAMNLFEGEIPSSIGNCQNLNILYLSENNLSGPIPLGVFSLFSLVFLNLSHNSLSGILPVEVGKLKNIDHLDLSKNRLSGDIPETIGDCMSLEYIILRGNSFHGIIPSTFASLKGLLYLDLSENNLSGSIPEALQSIPVLEYLNVSFNMLDGMVPHKGIFGQASSISILGNSELCGGISKLKLPPCPIKVTKRKKHHSLMGIIVEFEEVVAIKIFNLQKKGAHKSFMSECNALKNIRHRNLVKILTCCSSINDEGHDFKALVFEYMSNGSLEKWLHPAIGNTEHQTNYLLHQRLDIIVDVASALHYLHYECEQPVIHCDLKPSNVLLDENMVARLTDFGLARLLSKCSFSREQSSTIGIKGTIGYTPPEYGMGSNASIEGDVYSFGILVLEMLTRRRPTEEMFKDGHNLHNYVKASFPNKLLQIVDEAIFPRGSNQTMESTEDGYLENMTINNPNIEKWLISLFRIGLACSVDSPKERMNMIDVRRELNSLKSSFLLWWN 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2115 933 Pfam Protein kinase domain 640 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2115 933 PANTHER OS04G0122200 PROTEIN 634 930 - -
Sto4g2115 933 PANTHER OS04G0122200 PROTEIN 328 636 - -
Sto4g2115 933 PANTHER OS04G0122200 PROTEIN 30 320 - -
Sto4g2115 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Sto4g2115 933 Gene3D Ribonuclease Inhibitor 44 154 IPR032675 -
Sto4g2115 933 SUPERFAMILY L domain-like 328 609 - -
Sto4g2115 933 SMART LRR_sd22_2 498 517 - -
Sto4g2115 933 SMART LRR_sd22_2 354 380 - -
Sto4g2115 933 SMART LRR_sd22_2 229 255 - -
Sto4g2115 933 SMART LRR_sd22_2 402 428 - -
Sto4g2115 933 SMART LRR_sd22_2 181 207 - -
Sto4g2115 933 SMART LRR_sd22_2 133 156 - -
Sto4g2115 933 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Sto4g2115 933 SMART LRR_typ_2 205 229 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 378 401 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 278 302 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 474 497 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 426 450 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 253 277 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 546 569 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 133 157 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 498 522 IPR003591 -
Sto4g2115 933 SMART LRR_typ_2 181 204 IPR003591 -
Sto4g2115 933 Gene3D Transferase(Phosphotransferase) domain 1 703 928 - -
Sto4g2115 933 SUPERFAMILY Protein kinase-like (PK-like) 640 921 IPR011009 -
Sto4g2115 933 SUPERFAMILY L domain-like 41 345 - -
Sto4g2115 933 SMART serkin_6 630 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2115 933 Gene3D Phosphorylase Kinase; domain 1 629 702 - -
Sto4g2115 933 Gene3D Ribonuclease Inhibitor 155 229 IPR032675 -
Sto4g2115 933 Pfam Leucine rich repeat 524 583 IPR001611 GO:0005515
Sto4g2115 933 PANTHER LRR RECEPTOR-LIKE KINASE 30 320 - -
Sto4g2115 933 PANTHER LRR RECEPTOR-LIKE KINASE 328 636 - -
Sto4g2115 933 PANTHER LRR RECEPTOR-LIKE KINASE 634 930 - -
Sto4g2115 933 Gene3D Ribonuclease Inhibitor 230 620 IPR032675 -
Sto4g2115 933 ProSiteProfiles Protein kinase domain profile. 582 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2115 Sto-Chr4 22595930 22600176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2115 39 929 Receptor kinase-like Gene Family AT5G20480 36.301 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto4g2115 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2115 - - gmx:100785561 929.858