Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1985 ATGACGCGAGTAATATGGAAAATGATTAAAGATAAGCTTATTTCACCTTATCTGGAGCTGGATATTAAGTACTTTGACCTTGGCCTTCCTCATCGTGATGCTACTAATGATAGAGTCACCATTGAAAGTGCTGAAGCTACTCTCAAgtaTAATGTGGCAATCAAATGCGCAACTATAACTCCTGATGAAGCTCGTGTCAAGGAGTTTAACTTAAAACAAATGTGGAAGAGTCCAAATGGGACAATTCGGAACATTTTAAATGGTACAGTTTTTAGAGAGCCAATTATCTGTAGAAACATCCCTCGTCTTGTTTCAgGTTGGACAAAGCCAATATGTATTGGAAGGCATGCATTTGGGGATCAATACCGAGCAACTGATACAGTAGTAAAAGGACCGGGAAAGCTAAAATTGGTGTTTGCACCCAATGGACATGGTGAGATAAAAGAGTTAGAGGTCTATGAATTTACTGGTGCTGGAGGCATAGCTTTGTCCATGTATAACACTGATGAGTCCATTCGAGCTTTTGCTGAGGCTTCGATGAATATTGCTTACCAGAAAAGGTGGCCACTCTATCTTAGCACTAAAAATACAATTCTCAAGAAATATGATGGAAGATTCAAGGACATTTTCCAGGAAGTTTATGACAGTCAATGGAGTTCCAAGTTCAAAGCTGCAGGGATATGGTATGAACATCGCCTCATTGATGATATGGTTGCCTATGCTCTTAAAAGTGATGGAGGTTATGTATGGGCCTGCAAGAATTATGATGGGGATGTGCAGAGTGACTTCTTAGCCCAAGGATTTGGTTCTTTGGGCTTGATGACATCAGTACTGGTTTGCCCAGATGGGAAAACTATTGAAGCTGAGGCAGCCCATGGCACTGTCACTCGTCATTACAGGGTTCACCAGCAGGGAGGTGAAACCAGCACAAACAGTATAGCATCCATTTTTGCTTGGTCACGAGGTCTTGCACATAGGGCAAAGTTGGATGGCAATGCCAGGTTGTTGGACTTCACACAGAAACTTGAAGCAGCTTGCATTGGAACAGTTGAATTGGGAAAGATGACAAAAGATCTTGCACTTCTTGTTCATGGACCAAAGGTTTCTAGGTCTCAGTATCTGAATACTGAAGAGTTTATTGATGCTGTAGCGAAGGAGCTCAAAACAAGATTATCTACCAAATCAAAACTGTAA 1194 0.4121 MTRVIWKMIKDKLISPYLELDIKYFDLGLPHRDATNDRVTIESAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICRNIPRLVSGWTKPICIGRHAFGDQYRATDTVVKGPGKLKLVFAPNGHGEIKELEVYEFTGAGGIALSMYNTDESIRAFAEASMNIAYQKRWPLYLSTKNTILKKYDGRFKDIFQEVYDSQWSSKFKAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQQGGETSTNSIASIFAWSRGLAHRAKLDGNARLLDFTQKLEAACIGTVELGKMTKDLALLVHGPKVSRSQYLNTEEFIDAVAKELKTRLSTKSKL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1985 397 PIRSF IDH_NADP 1 394 IPR004790 GO:0004450|GO:0006102
Sto4g1985 397 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 1 391 - -
Sto4g1985 397 Gene3D Isopropylmalate Dehydrogenase 1 396 - -
Sto4g1985 397 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 1 396 - -
Sto4g1985 397 TIGRFAM nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 1 392 IPR004790 GO:0004450|GO:0006102
Sto4g1985 397 Pfam Isocitrate/isopropylmalate dehydrogenase 1 383 IPR024084 -
Sto4g1985 397 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 1 396 IPR004790 GO:0004450|GO:0006102
Sto4g1985 397 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 254 273 IPR019818 GO:0000287|GO:0016616|GO:0051287
Sto4g1985 397 SMART Iso_dh_2 1 383 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1985 Sto-Chr4 21013776 21017190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1985 K00031 - gmx:606295 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g1985 4 21013776 21017190 Sto4g1985 4 21013776 21017190 ECH