Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1981 ATGAAGAACATCACTCGAAACGATTGCTTCACTGTAATGAAGGAAACGTcctGTATTTACATAATTAATCTTGGCAAGACATGGGAGAAGCTTCAGCTTGCCGCCAGGGTTATAGTTGCCATTGAGAACCCTCAAGATATTATTGTTCAGTCTGCCAGGCCATATGGTCAAAGAGCTGTGCTTAAGTTTGCTCAATACATTGGTGCCCATGCACTTCCCATCAAGGAAGCTGCTCTTGGAAATATACCAACTATAGCTTTCTGTGACACTGATTCTCCCATGCGGTATGTTGATATTGGTATTCCTGCCAATAACAAGGGAAAGCATAGCATCGATTGTCTCTTTTGGCTATTAGCAAGGATGGTACTACAGATGCGGGGTACTATTCGTCCAGGGCTCAAGTGGGATGTTatgGTGGATTTATTCTTCTATAGAGAGCCTGAGGAGGCCAAACAACTAGAGGAAAAGGAGGCACCTGTTCAGGATTATGCTGCTGGGGATTTCGGTGCTCCTGTTCCACAACCGATCCCCGCAATTCCTAGTGCCAACTGGACCCCAGAAGCCAGAGATCGGAGTGAATCTGTTCCAGCTCCACAAGTTCCTGTTCCTGGAATTGAAAATGTTCCTGCCACTGGCTGGGATTAA 645 0.4543 MKNITRNDCFTVMKETSCIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYIGAHALPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIDCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQLEEKEAPVQDYAAGDFGAPVPQPIPAIPSANWTPEARDRSESVPAPQVPVPGIENVPATGWD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1981 214 CDD RPS2 19 124 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto4g1981 214 Pfam Ribosomal protein S2 73 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto4g1981 214 PRINTS Ribosomal protein S2 signature 18 27 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto4g1981 214 PRINTS Ribosomal protein S2 signature 76 87 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto4g1981 214 PRINTS Ribosomal protein S2 signature 97 111 IPR001865 GO:0003735|GO:0005840|GO:0006412
Sto4g1981 214 PANTHER 40S RIBOSOMAL PROTEIN SA 73 214 - -
Sto4g1981 214 PANTHER 40S RIBOSOMAL PROTEIN SA 19 71 - -
Sto4g1981 214 Gene3D - 72 159 - -
Sto4g1981 214 Gene3D - 5 71 - -
Sto4g1981 214 MobiDBLite consensus disorder prediction 175 214 - -
Sto4g1981 214 SUPERFAMILY Ribosomal protein S2 13 140 IPR023591 -
Sto4g1981 214 PANTHER 40S RIBOSOMAL PROTEIN SA 73 214 IPR005707 GO:0003735|GO:0006412|GO:0015935
Sto4g1981 214 PANTHER 40S RIBOSOMAL PROTEIN SA 19 71 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1981 Sto-Chr4 20988026 20991545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1981 10 214 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 57.377 1.38e-84 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1981 K02998 - gmx:548014 295.819