Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1948 ATGGCATCGAGGAATCAACCTATTTCTTCCATGAATCCGATGCAGCACCGAGACACAACCATCAAAGTGCGTGTTGTTCGTTTGTGGTGTGTTCCGCCTTACTCCTCCAATACAAGCAAACCTAATACAGGTGTTGTTGCAATTCAAATGGTTTTATGTGACTCTAAGAATTGTACTATTGGTGTAAGTGTACCCAGTATGTACCTGAATAAATTCAAAGGTGCTTTGGTTGAAGGTggtgtttattttatttcacgATTTGGAGTTGGTGGTAGTGGAGGCAATTTCCGTATTACCACTCATGCTTTTAAGATCAACTTCCAATTTGGTACACGCGTAATTCCTACTGTTGATGACCcgaatattcataaatttggcTTTGACTGGGTGACAGCAGAGTCTATTACCTCTGGCAATGCAAATGAGAAAACTCTGTCATCTAAAGATGACGCCTCCTCCAAAAGAGTTACGATTGAGATAGAAGATAGAGcAAGGTCTAGGGTGAGTGCTACTCTTTGGGGCCGTTACTGTGATCAGATTGAAAAGTTCATGAACAAGCACAAAGAAGGTCCTGTTGTTATTGCTTTGCAATACTGCAAGATAAAAGTTTTTAATGGTCATCGTAGTCTTTCCAATTCCATGCATGCAACGCGTGTACTGATCAACGAGGATCTTGAAGATTTCAGGGGATTTCATGATAAAGATTCTGGAAGCAATCTGAAGAGTCCTTTGAGAGGAAATGAGTCTATTCACTGTATTATTGGTTCTGTGCTCAAGGTTGATGATGATTCTATGCAGTCCTTAGCCAAGTTTGAAAAGTTTCTTGGTATACGATTTGTGTTCAAGGTGGGGGTGAAATTGGCAACTTGGAGTCCTACTCCTTTGTTAACAGTACATGCAATGTCTTGGGATCAAGATCTTATTAAGAAGCTATCTGCTGATTCCCCTTTAGATGTGGTTGCAACTGAACAATTTGGAGATACGAATATTTGTTCCAGTAACTCCCAAGATGTCACCGGTGGTGACGTTTCTTCTCAGAATTTGACTCCTAATGTAGAAGTTGTGAAGAATAATCTTGACAACGAGACAGCGAACCCGAGATATGCTATTGAAGGTTGTTCTTTGTCCTTTTCTGAAGAAGTTACATCTGAAGATCGTGTCACCACTAGCAGTAGCATGGGTAATTCATCTGAAGACTCCAATACTAAGAGGAGAGCCTATGACTTCAATGAAGTTAACACTGTTAGCTTAGATGTTCTAAAGAAGGTTAAACTGGAGAAGTTGTAA 1287 0.3916 MASRNQPISSMNPMQHRDTTIKVRVVRLWCVPPYSSNTSKPNTGVVAIQMVLCDSKNCTIGVSVPSMYLNKFKGALVEGGVYFISRFGVGGSGGNFRITTHAFKINFQFGTRVIPTVDDPNIHKFGFDWVTAESITSGNANEKTLSSKDDASSKRVTIEIEDRARSRVSATLWGRYCDQIEKFMNKHKEGPVVIALQYCKIKVFNGHRSLSNSMHATRVLINEDLEDFRGFHDKDSGSNLKSPLRGNESIHCIIGSVLKVDDDSMQSLAKFEKFLGIRFVFKVGVKLATWSPTPLLTVHAMSWDQDLIKKLSADSPLDVVATEQFGDTNICSSNSQDVTGGDVSSQNLTPNVEVVKNNLDNETANPRYAIEGCSLSFSEEVTSEDRVTTSSSMGNSSEDSNTKRRAYDFNEVNTVSLDVLKKVKLEKL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1948 428 MobiDBLite consensus disorder prediction 384 400 - -
Sto4g1948 428 CDD RPA1_DBD_B_like 144 231 - -
Sto4g1948 428 SUPERFAMILY Nucleic acid-binding proteins 128 232 IPR012340 -
Sto4g1948 428 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 7 229 - -
Sto4g1948 428 PANTHER REPLICATION FACTOR A 1, RFA1 7 229 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sto4g1948 428 SUPERFAMILY Nucleic acid-binding proteins 7 125 IPR012340 -
Sto4g1948 428 Pfam Domain of unknown function DUF223 50 142 IPR003871 -
Sto4g1948 428 MobiDBLite consensus disorder prediction 384 404 - -
Sto4g1948 428 CDD RPA1_DBD_A_like 20 113 - -
Sto4g1948 428 Pfam Replication protein A OB domain 143 213 IPR031657 -
Sto4g1948 428 Gene3D - 4 115 IPR012340 -
Sto4g1948 428 Gene3D - 135 241 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1948 Sto-Chr4 20628742 20630951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1948 4 229 Core DNA Replication Machinery Family AT5G45400 23.967 1.53e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1948 - - soe:110778367 130.568