Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1901 ATGGCTGATATTTCTGCAGATGATTATTCCTGGAGAAAATATGGACAAAAGCTCATCAAGGGTTCTCCTTACCCcagGCAATGGCTGCAAGGGTGTTTCGGCCACctggtggccgaaacacctttGAGCATTGGTGGCCGAAACACCCGTGTAGTCAGGGTGCAGCAGACTTGGGCCACCAGATTGTACCGGCTTATGCAAATGATGGTCGGAAAACGTGAGATGGCAGCATGGAGGGCGAGCACTGTTAAACCCAGGACGTACTTGCTTCATAGCCGGGAAAAGTTGCCCTCGAGGTCCCCTCCTCTTCGACTCCAGCATGGAGTGCAGGTAGGATTGGAGCATGCATTGGAAGGATTGGAGCATGCTATGGGTGTCCTTCACTCCAATCCACTCCATGCTGGACGCTGGCCGGAGGAAGATCTTGGGGAACCCAAGACCCCCTCACGGTCATCTACATAA 462 0.5043 MADISADDYSWRKYGQKLIKGSPYPRQWLQGCFGHLVAETPLSIGGRNTRVVRVQQTWATRLYRLMQMMVGKREMAAWRASTVKPRTYLLHSREKLPSRSPPLRLQHGVQVGLEHALEGLEHAMGVLHSNPLHAGRWPEEDLGEPKTPSRSST 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1901 153 MobiDBLite consensus disorder prediction 131 153 - -
Sto4g1901 153 SUPERFAMILY WRKY DNA-binding domain 3 29 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto4g1901 153 Gene3D WRKY domain 1 36 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto4g1901 153 SMART WRKY_cls 5 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto4g1901 153 Pfam WRKY DNA -binding domain 7 28 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto4g1901 153 ProSiteProfiles WRKY domain profile. 1 30 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1901 Sto-Chr4 19948589 19955954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1901 1 32 WRKY Transcription Factor Family AT2G30590 64.865 8.96e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto4g1901 WRKY 4.4e-07 CL0274