Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1899 ATGAGTCCAATGAGTCTCCCACCTGGATTTAGGTTCCATCCAACAGATGAAGAACTTGTTTCTTACTacttagaaagaaaaattacagGTCGCTCAATAGACCTTGATATTATCCCAGAAGTTGATCTTTACAAATGTGAACCATGGGATTTACcagATAAGTCATTTTTGCCAAGCAAAGATATGGAGTGGTATTTTTACAGTCAAAGGGATAGAAAATACCCAAATGGGTCAAGGACTAATAGAGCAACAAGAGGTGGTTATTGGAAAGCCACAGGGAAAGATAGGAGTGTGAATTCTCAAAAACTAGGAGGCATTATTGGGTTGAAGAAGACATTGGTGTTTTATAGAGGAAGGGCACCTCATGGCATTAGGACTAATTGGGTTATGCATGAGTATCGCCTCCTTGATAATTCACACCCTACTCCAACTCCAACGACATCTTTCTCTTCTTTAAAGGATTCCTATTCATTGTGTCGTGTTTTCAAGAAGACAAATCAAATCTCAGAATTGGCTGGAGAAGATGGaactaattataagaaaaataatgcaAAGAATAAGGAATCAAAGAGGGTGGactcagaagaagaagatgatgagaaAGTTgtgaatcatcatcatcatcatgagcattctaataataataaaaaccctAATAATTGTGATGCTTCTTCAGATCTCACTCAAGGAACACCTACTGATCAAACTGGTATGGTGGATGATTTTCAACCTCATTTTGCTTGTGATGAAGCAAACAGTGATGCTAATTACTCCTATAATTCTCTTTGGGGCAATGCCATGGAGCAACCATCAAATCTATTATTTCAgtcgAACACACgctaa 843 0.331 MSPMSLPPGFRFHPTDEELVSYYLERKITGRSIDLDIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSQRDRKYPNGSRTNRATRGGYWKATGKDRSVNSQKLGGIIGLKKTLVFYRGRAPHGIRTNWVMHEYRLLDNSHPTPTPTTSFSSLKDSYSLCRVFKKTNQISELAGEDGTNYKKNNAKNKESKRVDSEEEDDEKVVNHHHHHEHSNNNKNPNNCDASSDLTQGTPTDQTGMVDDFQPHFACDEANSDANYSYNSLWGNAMEQPSNLLFQSNTR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1899 280 MobiDBLite consensus disorder prediction 173 241 - -
Sto4g1899 280 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Sto4g1899 280 Gene3D NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Sto4g1899 280 MobiDBLite consensus disorder prediction 180 207 - -
Sto4g1899 280 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Sto4g1899 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86 1 229 - -
Sto4g1899 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
Sto4g1899 280 MobiDBLite consensus disorder prediction 216 238 - -
Sto4g1899 280 ProSiteProfiles NAC domain profile. 6 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1899 Sto-Chr4 19903035 19906065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1899 1 247 NAC Transcription Factor Family AT1G54330 56.471 8.23e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g1899 NAM 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1899 - - aip:107611200 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g1899 4 19903035 19906065 Sto4g1899 4 19903035 19906065 ECH