Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1898 ATGGGACATCGTTGCTGCAGCAAACAGAAGATAAAGAGAGGACTATGGTCTCCTGAAGAAGATGAGAAGCTTATTACATATATCACCACCCATCCTCATACAAGTTGGAGTTCTATTCCTAAACAAGCAGGcacttaa 138 0.3986 MGHRCCSKQKIKRGLWSPEEDEKLITYITTHPHTSWSSIPKQAGT 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1898 45 SUPERFAMILY Homeodomain-like 7 43 IPR009057 -
Sto4g1898 45 PANTHER BNAC05G40480D PROTEIN 1 44 - -
Sto4g1898 45 CDD SANT 16 45 IPR001005 -
Sto4g1898 45 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 45 IPR017930 -
Sto4g1898 45 PANTHER MYB DOMAIN PROTEIN 55 1 44 - -
Sto4g1898 45 Pfam Myb-like DNA-binding domain 13 45 IPR001005 -
Sto4g1898 45 Gene3D - 10 45 - -
Sto4g1898 45 ProSiteProfiles Myb-like domain profile. 8 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1898 Sto-Chr4 19893340 19893477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1898 1 44 MYB Transcription Factor Family AT3G12720 79.545 3.11e-21 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto4g1898 Myb_DNA-binding 4.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1898 K09422 - ming:122092735 87.0409