Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1858 ATGTCTCTCTCACGCCCCATCACTCCTCTGAGTCCCACTTCTTCAACTTCAGcTTCTCTTCCAATTGCATCAAATGTAAAGAGAAGGATGAATAGTACAGTTCTGTGCCTTGAGGGGACTAAAgagaaaatcaagaaaatgtTCAATAAGGTTGAACTTTCTGTTTCTTCATATGATACAGCCTGGGTGGCAATGATTCCTTCTATAAATTCTCCTACTGTCCCGTTTTTCCCGGAGTGCGTAAATTGGTTGTTGGACAATCAACTATTTGATGGATCATGGGGTCTTCCTTATCGCCATCCGTTGTTATTGAAAGATGCTCTCTTATCTACCTTGGCTTGTGTCCTTGCTCTGAAGCAATGGGGTATTGGTGAACAACAGACAAACAGAGGTGTTCGATTTATTGAGTCAAATATTGCTTCAGCATATGATGAGAAGCAACATTCTCCTATTGGATTTGATATAATATTTCCTTCTCTTGTTGAGTCTGCCCAAGGTTTGGGCATAAATCTTTCCCTTGGTGCAACAAGTTTGGAAGCAATGATTCACAAGAGAGAGTTGGAGCTCAGAAGATGCTATCAAAGCAATTCAGAAGGGTGGAAAGCATATCTAGCATATGTTTCAGAAGGAATGGGTAAATCTCAAGACTGGAAAATGGTAATGAGGTATCAAAGAAAGAATGGATCTTTGTTTAACTCACCTGCTACAACAGCAGCAGTTTTTTCTCACCTCAAGAATGATGACAGTCTTAATTACCTCCAGTCTGCGCTAGAGAAGTTTGGAAATGCTGTTCCTACAGTTTACCCTCTGGACATATATGCTCGTCTATGTATGATCGACACTCTTAAAAGTTTGGGTATTGATCatcatttcagcaatgaaattCAATGTGTGTTAGATGAAACATACAGATACTGGCTGGAAGGGGAGGAAGATCTCTTCTTAGACCCTTCCAGCTGTGCAATGGCATTTCGTATATTACGTCTCAATGGATATGATGTATCTTCAGATCCATTTTATCAATATACAGAAGATAAATTCTTCAAATCCTTGAAAGGATACTTGAAGGATGTTGGCTCTGTTCTAGAGCTATATAAAGCTTCACAAATCAACATACACCCGGGTGAAGAAGTTTTGGTGAGACAAAATGCCTGGACAAAACGTTTTTTGAAGGAGGAATTGTCCTCTCACCGTGGACATGATGATAAATTTTATACTTATGTTGAACATGAGGTAAATGATGCACTTAAATTTCCTTGTCACACAAAATTGGAGCGTTTGTTAAACAGGAGATCTATGGAGCATTATAGTGTAGAAGATACAAGGATTTTAAAAACGTCATATAGGTCTTTTAATCTTGCTAACCAAGAATTTCTAAAGTTGGCTGTAGAAGACTTTAACATCTGCCAATCAATACATCGCGAAGAATTTAAACAGCTTTCAAGATGGATTGTAGATAGTAGACTAGACAAACTTAAATTTGCAAGGCAGAAATTGGCTTATTGTTACTTCACCAGTGCAGCTACACTTTTCCACCCCGAACTTTCTGATGCTCGCGTATCATGGGCAAAAAATGGGGTTCTCACAACAGTTGTGGATGATTTCTTTGATATTGTGGGTTCTAAAGAGGAGCTAGTGCAACTTATTCAACTGCTTGAGAAGTGGGATGTAGATCTCAACACAATTTCTTGTTCTGAGCCAGTCGAGATAATATTTCGTGCAGTTCGGAGCACAATTTGTGAGATTGGGGAGAGATCATTAAAGACGCAAGGAAAAAATGTGCAAGATCATGTTATCAAAATTTGGTTGGATTTGATGCGGTCTATGTTGAAGGAAGCTCAATGGTCGAAAACCAAGTACGTCCCCACAGTTGATGAATATATGGCAAATGCATATGTATCTTTTGCCTTAGGTCCTATCGTGCTTCCAACAGTTTATCTTGTAGGACCTAAGCTTCCAACTGAGGTCGCTGAAAACACTGAGTACAATTGTTTGTTTGAGCTTATGAGCACCTGCGGTCGTCTCCTTAATGATATTAACGGCTATAAGAGGGAATCTGAAGAAGGTAAACTGAATGCAGTAACTCTGCGCATCGTTCAAGGTAATGGGCGTGTTACGGCAGAGGAAGCCACTGAGgagattaaaaatattattgaggaaaagagaagagaacTTTTGAAATTAGTTTTGCAGGAAAAAGGGAGCATAGTTCCAAGAGCTTGCAAGGAAGTGTTTTGGAAAATGGTAAAAGTGTTGCACTTAGTTTACATAAAGGACGATGGATTTACTTCAAATGAGTTGTTATCTATTGTAAATGACGTACTTGAAAAGCCTGTCGTCCTTAATGAATTTTCAGTGGATGCAAAGGAAAACCTCAATTCCCTCTCAAAGTAG 2394 0.3818 MSLSRPITPLSPTSSTSASLPIASNVKRRMNSTVLCLEGTKEKIKKMFNKVELSVSSYDTAWVAMIPSINSPTVPFFPECVNWLLDNQLFDGSWGLPYRHPLLLKDALLSTLACVLALKQWGIGEQQTNRGVRFIESNIASAYDEKQHSPIGFDIIFPSLVESAQGLGINLSLGATSLEAMIHKRELELRRCYQSNSEGWKAYLAYVSEGMGKSQDWKMVMRYQRKNGSLFNSPATTAAVFSHLKNDDSLNYLQSALEKFGNAVPTVYPLDIYARLCMIDTLKSLGIDHHFSNEIQCVLDETYRYWLEGEEDLFLDPSSCAMAFRILRLNGYDVSSDPFYQYTEDKFFKSLKGYLKDVGSVLELYKASQINIHPGEEVLVRQNAWTKRFLKEELSSHRGHDDKFYTYVEHEVNDALKFPCHTKLERLLNRRSMEHYSVEDTRILKTSYRSFNLANQEFLKLAVEDFNICQSIHREEFKQLSRWIVDSRLDKLKFARQKLAYCYFTSAATLFHPELSDARVSWAKNGVLTTVVDDFFDIVGSKEELVQLIQLLEKWDVDLNTISCSEPVEIIFRAVRSTICEIGERSLKTQGKNVQDHVIKIWLDLMRSMLKEAQWSKTKYVPTVDEYMANAYVSFALGPIVLPTVYLVGPKLPTEVAENTEYNCLFELMSTCGRLLNDINGYKRESEEGKLNAVTLRIVQGNGRVTAEEATEEIKNIIEEKRRELLKLVLQEKGSIVPRACKEVFWKMVKVLHLVYIKDDGFTSNELLSIVNDVLEKPVVLNEFSVDAKENLNSLSK 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1858 797 Pfam Terpene synthase family, metal binding domain 459 724 IPR005630 GO:0000287|GO:0010333|GO:0016829
Sto4g1858 797 Gene3D Farnesyl Diphosphate Synthase 469 787 IPR008949 -
Sto4g1858 797 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 47 775 - -
Sto4g1858 797 Gene3D - 45 466 IPR036965 GO:0010333|GO:0016829
Sto4g1858 797 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 57 244 IPR008930 -
Sto4g1858 797 SFLD Terpene Cyclase Like 1 N-term 37 449 - -
Sto4g1858 797 SFLD Terpene Cyclase Like 1 C Terminal Domain 455 778 IPR034741 -
Sto4g1858 797 Pfam Terpene synthase, N-terminal domain 216 414 IPR001906 GO:0010333|GO:0016829
Sto4g1858 797 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 226 440 IPR008930 -
Sto4g1858 797 Coils Coil 704 727 - -
Sto4g1858 797 SFLD Isoprenoid Synthase Type I 455 778 - -
Sto4g1858 797 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 47 775 - -
Sto4g1858 797 CDD Terpene_cyclase_plant_C1 266 766 IPR044814 GO:0010333|GO:0016102
Sto4g1858 797 Gene3D - 54 257 - -
Sto4g1858 797 SUPERFAMILY Terpenoid synthases 455 779 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1858 Sto-Chr4 19276441 19282224 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1858 K04121 - gmx:100793849 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g1858 4 19276441 19282224 Sto4g1858 4 19276441 19282224 ECH