Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1710 ATGGATGGGGTCAGCCCTGGTAATGAAGCGCAGCAGTCTCAGTGCAGAGACTTGGGTGCTACATCCTCATCTTCAGCATCGACGGGGTTAGGATGGCGTCCCAGCCAGCTAGTGTTTACTCCATATATGCCGGGTGAAACTTCCGATAAGTCCCAAACTCTGCGTGTGGTTGTGAGAAAACCCCTGGTGACAAGATTGACCAAGGAAATAGTTGAGACATACCAAATATGTAATCCTCAGTTCAAGTATTCTGAAGAGCTAAATCCGAAAAGATATTTAACCAGCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCGGATCTTATTCTGACAGTGAACTTTGTCTTGATCAATTTAGAGAGAAATAGAAGATATATTGTCAAAGATGTCCTTGGTCATGGGACATTTGGACAAGTGGCTAAATGCTGGGTTTCAGATACTAAAAGCTTTGTGGCTGTGAAGATCATTAAAAACCAACCTGCCTACTATCAACAGGCACTGGTTGAAGTTTCTATTTTGACTACGTTAAACAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTACTTTGTATATCAACGGCATCTGTGCATATGTTTCGAACTTTTGGACACAAACTTGTATGAACTTATCAAGTTGAACCATTTTAGAGGATTATCACTGAGTATTGTTCAATTGTTCTCTAAGCAGaTATTACATGGACTGGCTCTATTAAAAGATGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACAAGTGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCTGCATGCATGGAAGACCGTACTGTTTACTCCTACATTCAGAGTCGGTACTATAGGTCTCCAGAGGTTCTTCTTGGATATCAATACACGACAGCTATTGATATGTGGTCCTTTGGCTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTCCCTGGAGCTTCTGAGTTTGATCTTTTGAGGCGGATGATTGAAATACTTGGAGGACAACCACCTGATTATCTACTGAGGGAGGCTAAGAACACTAGTAAATTCTTTAAGTGTGTTGGGAGTCTTCAGAATGGAGATATCAGTGAGATTTCATCAAATGGAAGAAGTGCTTATCAAGCATTGACGGAGGAAGAATATGAGACTAGAGAGTTGAAGAAGCCGTCAATTGGGAAAGAATATTTTAATCATATGAATCTTGAGGCAATTGTTACAAACTATCCCTACAGGAAGAACTTGCCTAAGGAAGATATTGTCAAAGAAAGTCAAATACGGTTGgctttaattgattttttgagAGGGCTTGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACCCACCCTTACGAGCCTCCTCCAGAGACCCCTCGCATGCCAGTCGTTCAAGGTATCAAGGTGGATCATCACCCTGGTGGAGGACACTGGTTTGCTGCTGGTCTATCTCCTAATGTATCAAGCAAAAACAGGCCGTCCCTGTATAGCAGTTCGCATTTTCAGATGGTGCAATATCCACCTGCTAACAGTTATGGCAGTGTAGGAAGCCATGGTAGCTATAATGATAGTGTTAGACTTGGAAGCAGCTATGGAAGTTATGGAGAAAGCAGTAACATGTTTGCTTACTATTCACCCGTTGGTCCATCCGGTATGCACATGCTTGGTCAGAGCAGTACATCAATGCTTGGAAATAGTCCTGATGCACGGAAGAGAGTTATTCAATACCAGGCTGGAAATGGGCTAGGTATAAGCCCGTCAGCTGGAAATTTCACCCATCTGCCCCTTGGTGCCAGTCCCTCACAATTTACTCCTCCAAGTTCCTTTGCACAAGTTTCCGCTGGCTCTCCAGGACACTATGGACCTACTTCTCCTGCAAGAGGCTCTTCTCATGGATCACCACTGGGGAAGACATCTGCAATTAGCCAGTTTAACAGAAGAAAAAATTGGGGATGTGCTGGAAGTCCACAAACTCAAGATATAACATTTTCTCCATATTGGCATGGTCAATGTCCTGACAGCTCCGGCCATGCTGAGGGAACAGCTCATGTTCTAAGTAGCTCGCCATCTTATCTGCAGTCAAATACTGATGCTGCAAGCTGGAAGCAGCGAGGAGGTGGAGGTGGATACTCTGCCAATCAAAAACCGACATGCTTGTTCATGCCAAGTTCTAACATAAACTTGCAATCAACAGAATTGGGTCATGACACCCCTGAGTCTTGTTTATCTTTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAAGATAGTTCAGATGTTAGCTGCTTGACAGCTGAGTTTGGCAGAAGTATGAATCTTGGTTCCACAGAACCATTGGTTGGATTTGGAAGGCCCCACCAAGTCTCCAGCACAAGCTCTTCTATATCTGTTCACAGACTAAATGGACCGGTTCAAGCGTATTCTAATGTAGAGATGGGTAGCCCGCCAGCTCATGATTTGCAAGCTGGATACATGCGCTCCATGTCAAAGCCTTTTCATCTCATGCCTCGAATTTTACAAAATTCTCCAAGCCGTTTTGGATTGCAACCTGTTCAAAGATTTGCCCATGGCAGACCCACTCGGGTGGGTGAATGGAATCAAATTAAGGTTCAGGCTCCTCCTTCCAGTTTCAGCAGTGGGGAACCACGTTCGCCAAGAAACAACTCATTTGCCAATAGTATGACATGGGGGCGAAGAGTAAATCCTCCCGTCTCAAACATTCCGCCAGCATCCCGTGCTAGAAAAGACTATGCAAGGATAGACTAG 2871 0.4343 MDGVSPGNEAQQSQCRDLGATSSSSASTGLGWRPSQLVFTPYMPGETSDKSQTLRVVVRKPLVTRLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNFVLINLERNRRYIVKDVLGHGTFGQVAKCWVSDTKSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYLLREAKNTSKFFKCVGSLQNGDISEISSNGRSAYQALTEEEYETRELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRMPVVQGIKVDHHPGGGHWFAAGLSPNVSSKNRPSLYSSSHFQMVQYPPANSYGSVGSHGSYNDSVRLGSSYGSYGESSNMFAYYSPVGPSGMHMLGQSSTSMLGNSPDARKRVIQYQAGNGLGISPSAGNFTHLPLGASPSQFTPPSSFAQVSAGSPGHYGPTSPARGSSHGSPLGKTSAISQFNRRKNWGCAGSPQTQDITFSPYWHGQCPDSSGHAEGTAHVLSSSPSYLQSNTDAASWKQRGGGGGYSANQKPTCLFMPSSNINLQSTELGHDTPESCLSLPDPGDWDPNYSDELLLQEDSSDVSCLTAEFGRSMNLGSTEPLVGFGRPHQVSSTSSSISVHRLNGPVQAYSNVEMGSPPAHDLQAGYMRSMSKPFHLMPRILQNSPSRFGLQPVQRFAHGRPTRVGEWNQIKVQAPPSSFSSGEPRSPRNNSFANSMTWGRRVNPPVSNIPPASRARKDYARID 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1710 956 MobiDBLite consensus disorder prediction 623 666 - -
Sto4g1710 956 MobiDBLite consensus disorder prediction 623 646 - -
Sto4g1710 956 PANTHER BNAC04G29850D PROTEIN 23 724 - -
Sto4g1710 956 SMART serkin_6 129 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g1710 956 PANTHER DUAL SPECIFICITY PROTEIN KINASE 23 724 - -
Sto4g1710 956 CDD PKc_YAK1 129 471 - -
Sto4g1710 956 Pfam Protein kinase domain 130 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g1710 956 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Sto4g1710 956 MobiDBLite consensus disorder prediction 905 935 - -
Sto4g1710 956 SUPERFAMILY Protein kinase-like (PK-like) 124 491 IPR011009 -
Sto4g1710 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Sto4g1710 956 ProSiteProfiles Protein kinase domain profile. 129 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g1710 956 Gene3D Phosphorylase Kinase; domain 1 94 209 - -
Sto4g1710 956 MobiDBLite consensus disorder prediction 905 956 - -
Sto4g1710 956 Gene3D Transferase(Phosphotransferase) domain 1 210 472 - -
Sto4g1710 956 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1710 Sto-Chr4 16747122 16778718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1710 128 357 MAP Kinase Gene Family AT3G18040 34.286 5.58e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Sto4g1710 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1710 K18670 - gmx:100792777 1521.14