Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1702 ATGGAAAAGCCGCCTTGCTTCTTCTGCAGTAGAATCCCTACTAATTTGTCTCCAAGACCGAGTTTGCATTTACGTTGTATTGCCTCTAATGTGCCCCTTTTTTCACTTCGATCTCTCTGCCTATTCAACCAAAATAAAGCCTATTCCTTGTGCAGATCATCCCCTCCCTTTGGCTTCCAACAACTAATTAGAAATGACATCAACGGCAGTGAAACTAAGCTTTCCAACAATACCAAAAGCAGAAGAAGACGTCGCTATAAAGCAACCACCAAGATTACTGATAATAATGCAACTAGCAAGAATGGGTCATCCCAATCTCTGCCAGTGGTACCGTCAGTGAGCTTGAGCACCCAGATAGAAGAACAGCAGCAGGAGCAGGGCCAAGGCATTGACAGGGCGAGAGAAAGTGGCGCTGCAGCGCCTCTGAACGTGAGTAGTATACATCAGAATGGAGACCCACTTGGGCGGAAGGATCTTGGCAAGAGCGTAGTGAGGTGGATTCGTCGTAGTATGAGGGCCATGGCTTCCGATTTTGCTTCCGCCGAGGCGCAGGGGGAGTTCTCCGAGCTGAGGCAGCGCATGGGACCGGGTCTTACTTTTGTTATCCAGGCTCAGCCTTATCTGAATGCGGATCCCATGCCTCTTGGCCTTGAAGTTATCTGCTTGAAGGCATGCACCCATTATCCCACTTTATTCGATCACTTTCAGAGGGAGCTGCGTGACGTTCTCCAACACCTCCAGCGTAAATCATTGGTCCAGAATTGGAGTGAAACCGAATCATGGAAACTACTGAAGGAGCTCGCTAGTTCAGCTCAGCATAAGGCAATTGCAAGAAAGGTAGCCCAGCCCAAGGTTGTCCATGGAGTTTTAGGGATGGACATAGAGAAGGTTAAGGCAATACAGCATAGGATTGATGAATTCACCAAGCGCATGTCAGAATTACTCCGTATAGAAAGGGATGCGGAGTTGGAGTTTACTCAGGAGGAACTTGATGCTGTTCCTAGACCAGATGATACTTCTGACACGTTGAAACCCATTGAGTTCTTGGTTAGCCATGGCCAGGCCCAGCAAGAACTCTGTGACACCATTTGTAATTTAAATGCTATCAGTACATCTACAGGACTAGGAGGAATGCATTTGGTGTTATTCAAGGTTGAAGGAAACCACCGTTTACCACCTACCACTCTTTCACCTGGAGACATGGTTTGTGTCAGAACGTGTGATAGCAGGGGTGCAGTCACCACTTCTTGTCTGCAAGGCTTTGTTAACAATCTTGGGGATGATGGCTGTAGTATCAGTGTTGCTTTAGAGTCACGTCATGGTGATCCTACATTCTCTAAACTCTTTGGGAAGAGTGTACGAATCGACCGGATTCAAGGACTGGCTGATACACTCACCTATGAGCGCAACTGTGAAGCCCTAATGCTACTTCAGAAGAATGGTTTACGAAAGAAGAATCCTTCTATTGCTGTTGTGAGTACTCTGTTTGGAGATCGGGAAGATGTTGCATGGCTTGAGAAAAATCATTTAGTTGACTGGGATGAAGAAAACATAAGGGGTCTTTTAGGAAGTGAAACCTTTGATAATTCCCAGCAAAGAGCAATTGCACTGGGTTTGAATAAGAAGAGGCCTGTAATGGTTATCCAAGGGCCTCCAGGTACAGGAAAGACAGGTTTGCTCAAGCAACTTATAGGATGTGCTGTTCAGCGAGGTGAAAGGGTTCTTGTAACTGCACCTACTAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATAGTGGATTAAACATTGTTCGGGTTGGCAATCCAGCTCGTATATCAAAAACTGTGGGATCAAAGTCATTGGGAGAAATTGTAAATGCTAAGCTTGCAAGTTTTCGAGCAGAGtatgaaaggaaaaagtcaGATCTAAGGAGAGATCTTAGACATTGTTTAAAAGATGATTCATTAGCTGCTGGCATACGCCAACTTCTGAAACAGCTGGGACGGTCActgaagaaaaaggaaaaggagacTATAAATGAAGTGCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTGATTCGAAGGCTAGATGCTTTTGACTTGGTTGTTATTGATGAAGCTGGACAGGCAATTGAACCTTCTTGCTGGATTCCTATATTGCAGGGAAAACGGTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCAGTCATATTATCTAGAAAGGCCCTAGAAGGTGGTCTTGGAATATCTCTACTAGAGAGGGCGACAACTTTGCATGAAGGAATTCTCACCACAAGGTTAACAGTGCAATACCGTATGAATGATGCAATTGCTAGTTGGGCATCAAAAGAGATGTATGGTGGATTATTGAAATCTTCTGAGACTGTTTTTTCTCATCTTCTTGTTGACTCTCCTTTTGTCAAGCGTACATGGCTAACACAATGCCCTCTGCTGTTACTGGATACGAGAATGCCATATGGAAGTCTGTCAGTTGGTTGTGAAGAGCATTTAGATCCAGCTGGAACAGGCTCATTTTATAATGAAGGAGAAGCTGATATTGTCGTGCAACATGTCTTTTCCTTAGTTTGTGCAGGTGTTATCCCAACTGCTATTGTGGTACAATCTCCTTATGTTGCTCAAGTACAACTTTTAAGGGACATGCTTGATGAGCTTCCAGAGGCTGCCGGTACTGAGGTTGCAACTATTGATAGCTTTCAAGGTCGGGAAGCTGATGCAGTAATTATATCGATGGTATGA 2769 0.441 MEKPPCFFCSRIPTNLSPRPSLHLRCIASNVPLFSLRSLCLFNQNKAYSLCRSSPPFGFQQLIRNDINGSETKLSNNTKSRRRRRYKATTKITDNNATSKNGSSQSLPVVPSVSLSTQIEEQQQEQGQGIDRARESGAAAPLNVSSIHQNGDPLGRKDLGKSVVRWIRRSMRAMASDFASAEAQGEFSELRQRMGPGLTFVIQAQPYLNADPMPLGLEVICLKACTHYPTLFDHFQRELRDVLQHLQRKSLVQNWSETESWKLLKELASSAQHKAIARKVAQPKVVHGVLGMDIEKVKAIQHRIDEFTKRMSELLRIERDAELEFTQEELDAVPRPDDTSDTLKPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSRGAVTTSCLQGFVNNLGDDGCSISVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVSTLFGDREDVAWLEKNHLVDWDEENIRGLLGSETFDNSQQRAIALGLNKKRPVMVIQGPPGTGKTGLLKQLIGCAVQRGERVLVTAPTNAAVDNMVEKLSNSGLNIVRVGNPARISKTVGSKSLGEIVNAKLASFRAEYERKKSDLRRDLRHCLKDDSLAAGIRQLLKQLGRSLKKKEKETINEVLSSAQVVLATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGILTTRLTVQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVDSPFVKRTWLTQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVFSLVCAGVIPTAIVVQSPYVAQVQLLRDMLDELPEAAGTEVATIDSFQGREADAVIISMV 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1702 922 Pfam AAA domain 753 922 IPR041679 -
Sto4g1702 922 Coils Coil 628 648 - -
Sto4g1702 922 Pfam AAA domain 527 743 IPR041677 GO:0004386
Sto4g1702 922 CDD SF1_C_Upf1 777 922 IPR041679 -
Sto4g1702 922 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 73 922 - -
Sto4g1702 922 SMART ultradead3 523 774 IPR014001 -
Sto4g1702 922 MobiDBLite consensus disorder prediction 70 154 - -
Sto4g1702 922 Gene3D - 775 922 IPR027417 -
Sto4g1702 922 Coils Coil 652 672 - -
Sto4g1702 922 Gene3D - 330 461 - -
Sto4g1702 922 MobiDBLite consensus disorder prediction 91 130 - -
Sto4g1702 922 Gene3D - 310 759 IPR027417 -
Sto4g1702 922 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 73 922 - -
Sto4g1702 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 526 922 IPR027417 -
Sto4g1702 922 SMART AAA_5 542 757 IPR003593 -
Sto4g1702 922 CDD DEXXQc_SMUBP2 527 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1702 Sto-Chr4 16677306 16691577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1702 518 716 Core DNA Replication Machinery Family AT1G08840 26.866 8.58e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1702 - - aip:107625008 1370.14