Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1612 ATGATGAATTTCCTTTTGACTTTTGATAAAGAAAAGGCTCAGCAAAATGAAAGTGTGCATTGTTGCAAATATTGCGAAAGGGTGTTCAGCAGTCGTAAGGCACTTGGAGGCCATTTAAGGACACATAAAAACCTTATTTGGAAAACTCCAAATTATCTTTGTTGCAACAATTCCGTCAATGGGAACCATCATGAGAATGATAATAAATTCATCATGTCTTCAAATCTTTCACATGGAACCAACCGTAACGCGTCCTCAAGAGAATTTCCCTTGGGTCGTCCTATGTATATGGGGTACACTAATAATCCTTTGGGTCTTCCACCCAATGGAGGCGCAATTGGATTTTGCCATTCAGAAGCCGAAGCAATGCGATCTTTCGTACACCGTTTTCCATATCTCTCGAGAAATTTGCTTCTTAAGAAGTATCACAACCACAATAGCCATTCATATGCTCCAGGTGTCTTATGTTCCGCGTGTCATTACAGGATGAATAATTTTTTCGAGTTCAAGGATTTCAATCCTCATCTAGTGCTTAAGGCAAGTAAACTTCTTGACATGAAGAGACATGGTTTTGCAAACCTCTTGTCTCCACCAGAAGATAAGTTTGGTGGGTCAACATTCTATCGTGATGACAGCATTAAGGGTAAAACTTGTTCAAGTGTGAGGAAGCGTTTCTTTAGTGAAGTTGCAGCAAATGCTATCAAGGCTTGTGCTCCGAAAAGGCCAAGGTTGAGATCTTTGTCACATGTTGGTTGGGAAAGAAATCTCCCTGCCATTGAGTTACATCTCTTTAAAGATGCAAATAACTATGTTTTAgcaattgatgaaaaaaaagtagATGAAGCAAATATGGATCTCTCACTTCACCTGTAG 873 0.3872 MMNFLLTFDKEKAQQNESVHCCKYCERVFSSRKALGGHLRTHKNLIWKTPNYLCCNNSVNGNHHENDNKFIMSSNLSHGTNRNASSREFPLGRPMYMGYTNNPLGLPPNGGAIGFCHSEAEAMRSFVHRFPYLSRNLLLKKYHNHNSHSYAPGVLCSACHYRMNNFFEFKDFNPHLVLKASKLLDMKRHGFANLLSPPEDKFGGSTFYRDDSIKGKTCSSVRKRFFSEVAANAIKACAPKRPRLRSLSHVGWERNLPAIELHLFKDANNYVLAIDEKKVDEANMDLSLHL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1612 290 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Sto4g1612 290 ProSitePatterns Zinc finger C2H2 type domain signature. 21 42 IPR013087 -
Sto4g1612 290 Gene3D Classic Zinc Finger 2 77 - -
Sto4g1612 290 Pfam C2H2-type zinc finger 19 43 - -
Sto4g1612 290 SUPERFAMILY beta-beta-alpha zinc fingers 16 44 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1612 Sto-Chr4 14084937 14085964 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto4g1612 zf-C2H2_6 2.9e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1612 - K09220 qsu:112012075 87.8113