Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1395 ATGACTTGTTTTCCTTTATTATTTGGTAAAAAATCGAATTCTTCGGCAAGGCTAGATCCCGACATTGAAGAAGGCGTTCACAATGTCAAACTTTTTACCTACAAAGCGCTAAGCATAGCCACTGATGATTTTAATCCTGCCAATAAAATTGGAGAGGGCGGTTTTGGTTCTGTTTTCAAGGGACGGCTAAAAGATGGAAAAGTTGCTGCTATTAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAGGGAGTTCTTGACAGAGATTAATGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGCTATATGGCTGTTGTGTGGAAGGAAATCACAGAATATTAGTCTACAATTACCTTGAGAATAACAGTCTTGCGCAAACTCTTCTAGGTGGAGGTCATAACACTATCCATTTCGATTGGCAAACACGGTCTAGAATATGCATTGGGATTGCTCGTGGGCTTGCCTTTCTTCATGAGGGAGTAAGACCTCGTATTGTTCATAGGGATATAAAAGCAAGCAACATTCTTCTTGACAAAGACCTTTCCCCCAAGATTTCAGATTTTGGGCTTGCAAAGCTTATGCCACCAAACATGACTCATGTCAGCACACGTGTGGCAGGAACTATAGGTTATTTGGCGCCAGAGTATGCAATAGGTGGACATCTTACACGGAAAGCTGACATCTACAGTTTTGGAGTCCTCCTTGTGGAGATTGTTAGTGGAAGATGCAACACAAATACACAATTACCAATAGGAGAACAGTACATTCTAGAAAGGACATGGGATCTCTACGAGCGAAGGGAGCTAGTAGGCTTGGTGGATGAATCGCTAAACGGGGAGTTCGACGCTGAGGTGGCTTCTAAGTTTCTGAAGATCAGCCTTCTCTGCACACAGGATGCTCCGAAGCTCCGGCCATCCATGTCTTCTGTTGTCAAGATGCTTACGGGCGAGATCGATGTCGATGACAAAAACATATCGAAACCAGCCTTGATATCTGATTTTATGGACCTTAAAGTCAGCAAAAAGCCAAAAAGTAATGCTGATATGAAGACTTCATCTTCAAACACTGCATCCTCCTCAGCCTCGTACAACCATGATACTACTTTGTCATCAGCTGCTTCAACCGCTGCAACTACAACCTTCACAGCACAATATGACCAAAGCATGTAA 1173 0.4246 MTCFPLLFGKKSNSSARLDPDIEEGVHNVKLFTYKALSIATDDFNPANKIGEGGFGSVFKGRLKDGKVAAIKVLSAESRQGVREFLTEINVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGGHNTIHFDWQTRSRICIGIARGLAFLHEGVRPRIVHRDIKASNILLDKDLSPKISDFGLAKLMPPNMTHVSTRVAGTIGYLAPEYAIGGHLTRKADIYSFGVLLVEIVSGRCNTNTQLPIGEQYILERTWDLYERRELVGLVDESLNGEFDAEVASKFLKISLLCTQDAPKLRPSMSSVVKMLTGEIDVDDKNISKPALISDFMDLKVSKKPKSNADMKTSSSNTASSSASYNHDTTLSSAASTAATTTFTAQYDQSM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1395 390 SUPERFAMILY Protein kinase-like (PK-like) 26 315 IPR011009 -
Sto4g1395 390 CDD STKc_IRAK 50 317 - -
Sto4g1395 390 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g1395 390 MobiDBLite consensus disorder prediction 347 366 - -
Sto4g1395 390 PANTHER - 2 376 - -
Sto4g1395 390 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Sto4g1395 390 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Sto4g1395 390 MobiDBLite consensus disorder prediction 345 366 - -
Sto4g1395 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Sto4g1395 390 Gene3D Transferase(Phosphotransferase) domain 1 120 336 - -
Sto4g1395 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 376 - -
Sto4g1395 390 Pfam Protein kinase domain 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g1395 390 ProSiteProfiles Protein kinase domain profile. 44 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1395 Sto-Chr4 10441638 10444776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1395 32 358 Receptor kinase-like Gene Family AT1G56120 53.211 2.81e-114 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g1395 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1395 - - gmx:100782320 600.512