Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1009 TTGTCGCGCCGGATTGGACGACGGCGATGTCGTTTGGACATCGATGGAGATGCTCCGGAGGTTGAAGAGGTCGAGGACGATGAATTCGTCAGAGATGTAGGAGATGCCCTCGAAGTCGTGGTCGCCGCTTCGGATTTTGATTTGTATTGGGATGGATTTGGCGCAGACGACGGTGGATTGGACGTGGGATTCCCTGGTGAGATTTTCATCCTAGGACAACAAATCATGAAAGGATGCCTGAATGATGACAAGGCCACAGAAGCAACTATTGATGCAGAGGATTATCTTCATACTGGTGATATTGGCTACATAGATGCCGACGATGAGATTttcatagttgacatagttaaggaACTGAACTCATCAAATTCAAAGGCTTTTAGCCAAAAGAATGTTGTTGCCGGTGAAGTTCCAATTGCTTTGTGGTTAAGTCCAATGGCTTTGATCTTACCGAGGAGGCTGTAA 465 0.4495 LSRRIGRRRCRLDIDGDAPEVEEVEDDEFVRDVGDALEVVVAASDFDLYWDGFGADDGGLDVGFPGEIFILGQQIMKGCLNDDKATEATIDAEDYLHTGDIGYIDADDEIFIVDIVKELNSSNSKAFSQKNVVAGEVPIALWLSPMALILPRRL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1009 154 SUPERFAMILY Acetyl-CoA synthetase-like 58 118 - -
Sto4g1009 154 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 60 120 - -
Sto4g1009 154 Gene3D Luciferase; Domain 3 55 114 - -
Sto4g1009 154 PANTHER 4-COUMARATE--COA LIGASE 2 60 120 - -
Sto4g1009 154 Pfam AMP-binding enzyme 61 118 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1009 Sto-Chr4 8394904 8397657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g1009 60 119 Monolignol Biosynthesis Gene Families AT1G65060 67.742 1.01e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g1009 K01904 - lja:Lj6g3v0933470.1 94.7449