Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0988 ATGGACCCAACCTCGATCCCACCTCTGCCCATCGTCACCTCCGTTGTTGCCACAGTAGATGAACGAAACAGCAACGTTGTAGTGGCCCATGGAACTCCAAACCATCCAACTTATAAAGAGATGATACACAATGCAATCGCGGCTCTGAAAAGGAGAAATGGGTCTAGCAAGAGAGCTATCGCCAAGTATATAGACCAAACCTTCACCCACCTCCCATCCACTCACTCCGCTTTGTTGACTCTCCATTTGAAGCGCTTGAAGAGCAAAGGTGTCCTCGTTATGGTCAAGAAATCTTACAAGTTTGCTAGATCTTATGCTTCCTCTCATCCCACCCAACCCAAACGTGGTCGACCTCGCAAGCCCAACCCAGAACAACCCCAATCGCTAGAGGCTCGTAACAATGCGAAGCGAATGTTGGTGGCGCTTGGGCTTGAAGATGAGCTCGCAAACTCTGGGGTGAAGAAGAGGGGTCTAGGTCGTCCACCCAAGGACAGAACAATGGAAGAACAAGCTACATCTGATAGTGATGATCTGAGGAGGAAGCTTCGATATTTTCAATCAAAAGTCAGGGAATCTCTTGTTCCATTTAAGGGCATAATTCAAGAACTGGAGACGCTGGCATCAATGGACCTTAATTAG 639 0.4804 MDPTSIPPLPIVTSVVATVDERNSNVVVAHGTPNHPTYKEMIHNAIAALKRRNGSSKRAIAKYIDQTFTHLPSTHSALLTLHLKRLKSKGVLVMVKKSYKFARSYASSHPTQPKRGRPRKPNPEQPQSLEARNNAKRMLVALGLEDELANSGVKKRGLGRPPKDRTMEEQATSDSDDLRRKLRYFQSKVRESLVPFKGIIQELETLASMDLN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0988 212 PANTHER HISTONE H1 15 104 - -
Sto4g0988 212 PANTHER HISTONE H1 113 210 - -
Sto4g0988 212 CDD H15 32 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0988 212 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 34 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0988 212 SMART h15plus2 32 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0988 212 MobiDBLite consensus disorder prediction 103 132 - -
Sto4g0988 212 Gene3D - 30 115 IPR036388 -
Sto4g0988 212 PANTHER HISTONE H1-LIKE 15 104 - -
Sto4g0988 212 PANTHER HISTONE H1-LIKE 113 210 - -
Sto4g0988 212 MobiDBLite consensus disorder prediction 152 176 - -
Sto4g0988 212 Pfam linker histone H1 and H5 family 35 96 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0988 212 SUPERFAMILY "Winged helix" DNA-binding domain 32 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0988 Sto-Chr4 8145429 8146527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0988 19 109 Single Myb Histone (SMH) Gene Family AT1G49950 36.170 6.44e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0988 - - aprc:113856313 137.502