Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0917 ATGGAAGGAAGGTCAAATATTATTGATGatgggaggaagaaggagagtaGTAGTAGTGGTAATGTGGGGCCGGCGGGGGTGTCGGCGCAGAGCAAGGCGGCCCGGGAGAGGCGGAGGAAGATCGCGGAGAGGACACGAGAGCTGGGGAAGCTGGTTCCTGCTGCTGCGGATTTGAATACTGCTGATATGCTTCAAGCTGCCGGCAAGTATTTGGCTTACTTGAAAGCTCAAGTTGCTATGCTTCAACTCATTAACACAATGCAgGACATAAAGGCATCGAGTGGAACTGAAGAATTGAAGGCCATGCTTAGATCTCCATTTGTAGAAGAGAAGTTGTGCTTGAAGGAGAAGTGCTTAGTTCCAAAGGAGTTTGTGACCACTTTGAAGAATCTTCAAGATGTCAGATCAAAACCTTCAATTCTTAATGATCTTAATCAGCTAATTCAGACAGAATCTGAGGAGAAAAAATAG 471 0.4374 MEGRSNIIDDGRKKESSSSGNVGPAGVSAQSKAARERRRKIAERTRELGKLVPAAADLNTADMLQAAGKYLAYLKAQVAMLQLINTMQDIKASSGTEELKAMLRSPFVEEKLCLKEKCLVPKEFVTTLKNLQDVRSKPSILNDLNQLIQTESEEKK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0917 156 MobiDBLite consensus disorder prediction 1 40 - -
Sto4g0917 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 29 88 IPR036638 GO:0046983
Sto4g0917 156 MobiDBLite consensus disorder prediction 1 16 - -
Sto4g0917 156 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 10 145 - -
Sto4g0917 156 Pfam Helix-loop-helix DNA-binding domain 30 74 IPR011598 GO:0046983
Sto4g0917 156 SMART finulus 31 80 IPR011598 GO:0046983
Sto4g0917 156 Gene3D - 28 89 IPR036638 GO:0046983
Sto4g0917 156 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 145 - -
Sto4g0917 156 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 25 74 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0917 Sto-Chr4 7296761 7298751 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0917 27 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 45.600 7.04e-26 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto4g0917 HLH 0.00027 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0917 - - gmx:102665938 143.665