Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0882 ATGGTGGAGGCAAAGTTGCCTCCAGGTTTCAGGTTTCATCCCAGAGACGAAGAGCTTGTGTGTGATTATTTGATGAAGAAACTCACTCATCACTCTCATTACTATTCCTCTCTCTTGATCGACCTTGACTTGAACAAGTGCGAGCCTTGGGATATTCCAGAAAGAGCATGTGTAGGAGGGAAGGAATGGTATTTCTACACACAAAGAGACAGAAAGTATGCGACGGGGCTGAGGACGAACAGAGCCACAGCTTCAGGGTATTGGAAGGCCACTGGGAAGGACAGGGAAGTCCTTCGGAAGGGCAGTCTTGTAGGGATGAGGAAGACTTTGGTGTTCTATCATGGAAGGGCTCCCAAAGGCAAAAAGACTGATTGGGTCATGCATGAATTTCGCATCCAGCCTTCACTAATTCCTTCTCTTACAATTTCTTCCcccaagGAAGACTGGGTTTTGTGTAGAGTATTCTACAAGAACAGGGAAGAAATAGTGAAAGGTAGCATGGGAAGCATCTATGATGACACAGTAGCCAcagcttcttcttcatctcatcTTCCTCAACTAATGGACTCTTTCATCAGCTTTGAGCATCCCTCTCAGCCACCACCCCCACatgatgatgaagaaaaagaagatgatCATCACTACTATGAGCAAGTGCCCTGCTTCTCCAATCTTtcctctcatcatcatcatcatcttcttcatgataataaaaaccaaacaaaccctacttataataacaataacttcaaccacatgatgatgatgatgaccatGGATCACCCAAACTTAGTTACTGAAGAAGCATTATTTAAAGGGCCTCCATCCCCTGTTGCTACACCTTTGCATGTTTTTCGGCCATCCCCAACCGCGCCCTCAACTGTGTTTTCGGTTTCTTGA 900 0.3878 MVEAKLPPGFRFHPRDEELVCDYLMKKLTHHSHYYSSLLIDLDLNKCEPWDIPERACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDREVLRKGSLVGMRKTLVFYHGRAPKGKKTDWVMHEFRIQPSLIPSLTISSPKEDWVLCRVFYKNREEIVKGSMGSIYDDTVATASSSSHLPQLMDSFISFEHPSQPPPPHDDEEKEDDHHYYEQVPCFSNLSSHHHHHLLHDNKNQTNPTYNNNNFNHMMMMMTMDHPNLVTEEALFKGPPSPVATPLHVFRPSPTAPSTVFSVS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0882 299 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Sto4g0882 299 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 227 - -
Sto4g0882 299 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Sto4g0882 299 MobiDBLite consensus disorder prediction 192 213 - -
Sto4g0882 299 PANTHER OS08G0200600 PROTEIN 1 227 - -
Sto4g0882 299 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Sto4g0882 299 Gene3D NAC domain 15 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0882 Sto-Chr4 6967988 6976065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0882 1 229 NAC Transcription Factor Family AT1G56010 65.665 6.84e-107 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g0882 NAM 6.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0882 - - qsu:112026855 322.398