Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0858 ATGCTGGGAGGAGGCTTACGCGTTTCATGGGGTTGTTTTGGCTCCAAATCAGAATTGCAAAACACAATTCAGTTTCCGCGCTACTTCAGATCCGGCGACGCAAAAGGAAGACAAGGGAGTGCAGCAGATTTTACGTTCAACCCATTCAACAAATCACAAAGTGCAGCAGCTACTTTCTCTGTGTTTTTAGCTTCTTGGAAGACAAAGTGTAGCAGATTTAGTTTGTTCGTTCATCAAGAAGCTAGCTTTCTCATTGTTCCATTGTTGTTTGAAGGCATCGATTATGTATGGGAAGTTGTTAATATGGAGCTTGAATGGAAGCCTAGAATTGGAATGGATTTTGACAGCATGAATAGTGCTTGGAAATTTTGGTCAGACTATGGTGGTAGAATGGGATTCGGTGTTAGGAAGGATTATTCCAACAAGAGTAAAAAAGATGGGTCAATAAGTTCTTGCCGATTTGTTTGTCATAAGGAAGGGTCAAGAGAAAAACataagaataattatttaatagttaATCCTCGACGTGAGATGAGAACTGATTGTAAAGCAAGAATATGCTTCTCCTTTCTGAATGGAAAGTTTAGAGTGAAGGACTTTGTAGAAGAACATAATCATGAACTCCATCACGTAGAAACTACACATATGATTGCTTCTCAACGGCATATGTCTGATATCCAACAACAAGAAATTGAGTTAGCTGATGATTCTGGAATCCAACAAAGGGCCTCTTATACACTTATGAGTAAGCATGTCGGGGGACGAGTCAATCTTGGATATACACGCTTGGATCAGAAGAACTATCTTCGCACCCGACGGCAAAAGAGTCTGGAGTACGGGGAAGCTGGTTGTTTATTGCGTTATTTCGAAGATCAACAATCGAAAAACCCAGCGTACTTTCAAACATATCTGATGGATTCAGAGGAACAAATAACGAACATATTTTGGGCTGACGCAAGAATGCGATTAGATTATGGCTACTTTGATGATGTTGTCTCTCTTGACACGACATATTGCACTAACAATGCACACAGGCCACTTGCCttgttttcaggatttaatcATCACAGAGGAGTGGTTCTTTTTCTGGCTGCATTGTTATATGACCAGATAGCGGCATCATTTAAGTGGTTATTTGAGACATTCTTGAAagttcataataaaaaaaaacctcaaaCTATTTTTACCGATCAAGATCAAGCAATGGCCAAAGCCTTACAAGAGGTGTTGTCTGACACATACCATGGATTATGCACATGGCATCTAATGCAGAACAGCATTAAGCACTTGGGCAACTTAATGAAACATGGGTCTCATTTCTTGCGGGACTTCAAGACTTGTATGTATGGCTATGAGGAAGAGACGGAGTTTGAAACGGCTTGGAGAGAGTGGAAAGTTTTGTTTTATCCTTACGATAAGACAATTTCTTGCACTTGTCGGAAGTTTGAGACTTGGGGCATATTGTGTTGCCATGCTCTTAAAGTGTTTGAAGCATACGATGTCAAGAAGCTTCCCGatcaatatattttgaaaaggtGGACAAAGGAGGCTAGAACCGGTATTATATATGATGCCAAAGGGAATGAAATTGAGGATGACTCGAAATTAGGTCGTACACTTCAATATAATTCCCTTTGCCATGAACTTGTCAATATAGCTTCTGAAGTCGCGGGTAAAGATGAAGAAGTCTCTTTCATTCGTATGGTTATGCATGAGGCCATGAAGAAAGTCATGGAATGTCGCTTGGAAAAAAGGCATGAGACAAACGAGAGAGATGACCCAATTCCACTTAGTAGAATTGATATGCCACAACCAACTGGCATCAAGAAGAGGGCTGGATCTAAAAGAAGGACTCGTATAAAGAGTAGGGTTGAGCTTCGACATCGAAATGGAAAGGCTTCAAAGTCCATGTCACAACCAATCATCACACTTTCTCAAAGTGAACAATCCACAGATATTGGAGCTTCAAGTCAAATGCAATTTGAGAATCCATTTAGTTTTACGAAATTGTTAATGGACCAAAGTGAAGGACCAAACTCTCTTGGAGGACCAAAGCTTGGTGGTGACAAGCTATGA 2076 0.3931 MLGGGLRVSWGCFGSKSELQNTIQFPRYFRSGDAKGRQGSAADFTFNPFNKSQSAAATFSVFLASWKTKCSRFSLFVHQEASFLIVPLLFEGIDYVWEVVNMELEWKPRIGMDFDSMNSAWKFWSDYGGRMGFGVRKDYSNKSKKDGSISSCRFVCHKEGSREKHKNNYLIVNPRREMRTDCKARICFSFLNGKFRVKDFVEEHNHELHHVETTHMIASQRHMSDIQQQEIELADDSGIQQRASYTLMSKHVGGRVNLGYTRLDQKNYLRTRRQKSLEYGEAGCLLRYFEDQQSKNPAYFQTYLMDSEEQITNIFWADARMRLDYGYFDDVVSLDTTYCTNNAHRPLALFSGFNHHRGVVLFLAALLYDQIAASFKWLFETFLKVHNKKKPQTIFTDQDQAMAKALQEVLSDTYHGLCTWHLMQNSIKHLGNLMKHGSHFLRDFKTCMYGYEEETEFETAWREWKVLFYPYDKTISCTCRKFETWGILCCHALKVFEAYDVKKLPDQYILKRWTKEARTGIIYDAKGNEIEDDSKLGRTLQYNSLCHELVNIASEVAGKDEEVSFIRMVMHEAMKKVMECRLEKRHETNERDDPIPLSRIDMPQPTGIKKRAGSKRRTRIKSRVELRHRNGKASKSMSQPIITLSQSEQSTDIGASSQMQFENPFSFTKLLMDQSEGPNSLGGPKLGGDKL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0858 691 MobiDBLite consensus disorder prediction 586 620 - -
Sto4g0858 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 463 588 IPR031052 GO:0006355
Sto4g0858 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 104 463 IPR031052 GO:0006355
Sto4g0858 691 Pfam SWIM zinc finger 474 499 IPR007527 GO:0008270
Sto4g0858 691 ProSiteProfiles Zinc finger SWIM-type profile. 464 500 IPR007527 GO:0008270
Sto4g0858 691 SMART 26again6 475 502 IPR006564 GO:0008270
Sto4g0858 691 Pfam FAR1 DNA-binding domain 122 209 IPR004330 -
Sto4g0858 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 463 588 - -
Sto4g0858 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 104 463 - -
Sto4g0858 691 Pfam MULE transposase domain 331 425 IPR018289 -
Sto4g0858 691 MobiDBLite consensus disorder prediction 670 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0858 Sto-Chr4 6722975 6726197 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto4g0858 MULE 9.6e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0858 - - ahf:112709060 461.84