Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0853 ATGGATCCCAAATTATGCGCGAATGGTTGTGGCTTTTACAGTTGCTCTGAAACCTACAATCTTTGCTCAAAGTGTTACAAAGATCACATTCTTAACCTCACAAAATCATCAGTAAAGGAAATCACTGAATTAACTTCATCATTATCACTAACTGATGATCAAAACACGACCGCCAGCAAAACTAGTGAAATCAATAATTCTGAGACTGCTCATCAACAATCGGAGAAGAAGAGTAATAGATATCCAGAAGAGCATTCTTGCACTGTGAATTTCAAGCAAATTGGTCGTGAAATTTTGACCAAACAGAATCCTCTCATAAAGGCTGATAAATTAGATAAGATACTATAG 348 0.3592 MDPKLCANGCGFYSCSETYNLCSKCYKDHILNLTKSSVKEITELTSSLSLTDDQNTTASKTSEINNSETAHQQSEKKSNRYPEEHSCTVNFKQIGREILTKQNPLIKADKLDKIL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0853 115 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Sto4g0853 115 MobiDBLite consensus disorder prediction 52 84 - -
Sto4g0853 115 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Sto4g0853 115 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sto4g0853 115 Gene3D - 1 88 - -
Sto4g0853 115 SUPERFAMILY AN1-like Zinc finger 79 109 IPR035896 -
Sto4g0853 115 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Sto4g0853 115 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 51 - -
Sto4g0853 115 MobiDBLite consensus disorder prediction 52 72 - -
Sto4g0853 115 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 10 79 114 - -
Sto4g0853 115 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 10 5 75 - -
Sto4g0853 115 PANTHER AN1-TYPE ZINC FINGER PROTEIN 79 114 - -
Sto4g0853 115 PANTHER AN1-TYPE ZINC FINGER PROTEIN 5 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0853 Sto-Chr4 6692868 6693293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0853 4 114 C2H2 Transcription Factor Family AT3G52800 32.484 5.63e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0853 - - qsu:112026354 92.4337