Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0852 ATGGTGATAGAGGGGAATTTCAAAATCCAAGAGGGGTTTCACTTGATGCTGATATTTTGGTTTTGTGTCGTCCCAGTGGGTTCGATCAATGAAGATGGTTCAAATCTTTTGGAGTTTAAAGCTTCCCTTTCTGATGATCCTCATATGAGTCTTCATAACTGGAATTCTTCTGATTCGAACCCTTGCAATTGGACTGGTGTGCATTGCAATGATTCAATGGTGACTTCTGTAAATCTTTTTCATCTGAATCTCTCTGGTTCTTTATCTCCAGTCATCTGTAAGCTTCCTCATCTGGTTGAGTTGAATCTGTCAAAAAATCTCTTTTCTGGCCCCATTCCTGATGGTTTTGTTAACTGTAGTAGTCTAGAGATATTAGACCTTTGTACAAATAGGTTTCATGGAGAACTCAAGACTCCTGTGTGGAAAATCACCACACTTAGAAAGCTTTATCTGTGTGAAAATTTTCTGTATGGGGAAGTGCCAGAAGAGATTGGGAATTTAGCTTCCCTTGAAGAGCTAGTCATTTATAGCAATAACTTAACTGGGAGAATTCCCACATCAATAAGTAGATTGAAGCAGCTTAAAATCATCAGGGCTGGCTTGAATAGCTTCTCAGGTCCAATACCTGTAGAAATCAGTGAGTGTGAGAATTTGCAGATATTAGGATTGGCACAGAATCTTCTAGAAGGTTCAATCCCAAGGGAGCTTCAGAAGCTTCAGAACCTTACCAATTTAATTCTATGGCAGAATCTTATATCTGGAGAGATTCCACCTGAGATTGGGAATATGAGTAGATTGGAATTACTTGCTCTGAATCAGAATTCCTTAAGTGGAGTGATCCCCAAGGAGCTGGGTAAGTTAACCCTCTTACAGAGGTTGTACTTATACACCAACCACTTGAACGGGACGATTCCTTCGGAGCTAGGTAACTGTACTAGTGCCGTCGAGATCGATCTTTCGGAGAATCGGTTGAGCGGGTTTATTCCTAAGGAGTTGGCGCAGATATCTAATCTTAGCTTGCTTCATCTGTTTGAAAACCTTCTGCAGGGAGAAATCCCTAGGGAGCTTGGGCAGTTATCGCTGCTGAAAAAACTAGACCTGTCAATGAATAACTTAACTGGTACAATTCCACTGGAGTTTCAAAATCTTACATACATGGAGGATTTGCAGCTATTTGACAATCAACTTGAGGGTAAGATTCCTCCTCTTCTTGGAGCTAATAGCAACCTGACTATTCTTGATATATCTGCAAATAATCTTGTTGGTATGATTCCTGTCCATCTTTGCAAATATCAGAACTTGGAATTTCTGAGCCTCGGATCGAATAGGTTGTATGGGAACATTCCGTATGACCTGAAAACTTGCAAGTCACTTGTGCAGCTGATGCTGGGGAACAACCAGCTGACCGGGAGCCTCCCTGTTGAATTAAATGAACTTCATAATCTTTCTGCACTCGAACTTCATCAGAACCGGTTCTCTGGGCTTATAAACCCGGGGATAGGCCAGCTTCAGAATTTAGTGAGGCTTCTCTTGTCAGACAATTACTTTATTGGGTATCTCCCTCCTGAGATTGGAAAACTAGCACAGCTTGTCTCATTCAATGTTTCCTCTAATCTTCTAAGCGGAAGTATTCCTCACGAATTGGGAGACTGTGTGAAACTACAGAGGCTTGATCTTAGTAGGAATCAGTTCACTGGTGTCCTTCCAGATGAAATTGGCAAGCTGGTGAATCTGGAATTGTTGAAACTCTCCGATAATAAATTTTCTAGAGAAATTCCAAGCACTTTAGGGGATCTTACGCGTCTCACGGAGTTGGAACTTGGTGGTAACTTATTTTCAGGGAGCATTCCTGTTCGTTTGGGACGACTTGCTGCTCTTCAGATTGCGCTTAACATGAGCCATAACAAACTATCTGGTGCAATTCCTGACAGCCTAGGTAACTTACAAATGTTGGAATCCCTTTATTTAAATGACAATGAACTTGTTGGCGAAATTCCCACATCAATTGGTGACCTGCCCAGCCTTTTAGTATGCAATGTTTCTAACAATCATTTGGTTGGAACCATTCCGAATACTCCTGCATTTCGAAGGATGGATTCCACGAATTTTGCTGGGAACAACGGGTTGTGCCGATTAGGTTCCTATCATTGTCGTCCATCCATATCTCCATCATGTACTCCAAAACCAAGCTGGATCAGAGATGGTTCATCAAGGGAAAAGATAGTGAGTATTGTTTCAGGTGTAGTTGGGTTAGTTTCTCTTATGTTCATAGTCTGTATATGCTGGGCTATGAAGCGCCGTCGTAGCCCCGCTTTTGTCTCACTCGAAGAACAAGCAAAGCCTCATGTCCTAGACAACTATTACTTCCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGAAATTTTTCGGAAGCTGCAGTTATAGGAAGAGGAGCATGTGGGACTGTGTATAAGGCTCTCATGGCGGATGGTGATGTGATTGCTGTCAAAAAGCTGAATTCCCATGGAGAAGGAGCGAATGTTGACAGAAGCTTTCTCGCGGAGATTTCGACCCTTGGAAAGATCAGGCACCGAAACATTGTGAAGCTGTATGGATTTTGTTTTCATGAGGATTCCAATATTCTCTTGTATGAGTACATGGAAAATGGCAGCCTTGGAGAACAACTTCATTCAAATCCAAACATGTGTTCACTGGATTGGAATTGTAGATATAAAATTGCTCTTGGAGCTGCCGAAGGCTTGTGCTATCTTCATTACGATTGTAAACCTCAAATCATCCACCGTGATATAAAGTCAAACAACATATTACTTGATGAAAGGTTTCAGGCTCATGTTGGAGACTTTGGCTTGGCAAAGTTAATTGACTTCTCCTACTCAAAATCCATGTCTGCTGTTGCAGGTTCTTATGGCTACATTGCTCCTGAATATGCTTACACCATGAAAGTGACTGAGAAATGCGACATCTATAGCTTCGGGGTTGTTCTGCTGGAACTAGTCACCGGACGCTCGCCGGTTCAACCATTGGAACAGGGTGGTGATCTGGTGACTTGGGTGAGAAAAGCGATTCAGGCGACTGTCCCGACGCGTGAATTATTTGACAAGCGGCTGAATCTGAATGAACAGAGAACAATTGAAGAGATGTCTCTTATTCTCAAAATTGCTTTATTTTGCACCAGCATGTCTCCTCTTAATAGGCCAACAATGAAAGAGGTCATTGCAATGTTGGTTGATGCTAGAGAGTATGTCAGCAATTCTCCTTCTACCCCTACTTCAGAATCACCACTTGAAGAAGATTTTTCTTCCAAAGTCTAA 3324 0.4203 MVIEGNFKIQEGFHLMLIFWFCVVPVGSINEDGSNLLEFKASLSDDPHMSLHNWNSSDSNPCNWTGVHCNDSMVTSVNLFHLNLSGSLSPVICKLPHLVELNLSKNLFSGPIPDGFVNCSSLEILDLCTNRFHGELKTPVWKITTLRKLYLCENFLYGEVPEEIGNLASLEELVIYSNNLTGRIPTSISRLKQLKIIRAGLNSFSGPIPVEISECENLQILGLAQNLLEGSIPRELQKLQNLTNLILWQNLISGEIPPEIGNMSRLELLALNQNSLSGVIPKELGKLTLLQRLYLYTNHLNGTIPSELGNCTSAVEIDLSENRLSGFIPKELAQISNLSLLHLFENLLQGEIPRELGQLSLLKKLDLSMNNLTGTIPLEFQNLTYMEDLQLFDNQLEGKIPPLLGANSNLTILDISANNLVGMIPVHLCKYQNLEFLSLGSNRLYGNIPYDLKTCKSLVQLMLGNNQLTGSLPVELNELHNLSALELHQNRFSGLINPGIGQLQNLVRLLLSDNYFIGYLPPEIGKLAQLVSFNVSSNLLSGSIPHELGDCVKLQRLDLSRNQFTGVLPDEIGKLVNLELLKLSDNKFSREIPSTLGDLTRLTELELGGNLFSGSIPVRLGRLAALQIALNMSHNKLSGAIPDSLGNLQMLESLYLNDNELVGEIPTSIGDLPSLLVCNVSNNHLVGTIPNTPAFRRMDSTNFAGNNGLCRLGSYHCRPSISPSCTPKPSWIRDGSSREKIVSIVSGVVGLVSLMFIVCICWAMKRRRSPAFVSLEEQAKPHVLDNYYFPKEGFTYQDLLEATGNFSEAAVIGRGACGTVYKALMADGDVIAVKKLNSHGEGANVDRSFLAEISTLGKIRHRNIVKLYGFCFHEDSNILLYEYMENGSLGEQLHSNPNMCSLDWNCRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDERFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRKAIQATVPTRELFDKRLNLNEQRTIEEMSLILKIALFCTSMSPLNRPTMKEVIAMLVDAREYVSNSPSTPTSESPLEEDFSSKV 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0852 1107 Gene3D Transferase(Phosphotransferase) domain 1 884 1096 - -
Sto4g0852 1107 SMART LRR_typ_2 479 503 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 287 311 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 239 263 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 599 623 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 95 119 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 575 598 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 552 574 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 648 672 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 527 551 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 167 191 IPR003591 -
Sto4g0852 1107 SMART LRR_typ_2 359 382 IPR003591 -
Sto4g0852 1107 SUPERFAMILY Protein kinase-like (PK-like) 785 1079 IPR011009 -
Sto4g0852 1107 Gene3D Ribonuclease Inhibitor 454 721 IPR032675 -
Sto4g0852 1107 Gene3D Ribonuclease Inhibitor 288 453 IPR032675 -
Sto4g0852 1107 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Sto4g0852 1107 MobiDBLite consensus disorder prediction 1087 1107 - -
Sto4g0852 1107 SUPERFAMILY RNI-like 365 690 - -
Sto4g0852 1107 Gene3D Phosphorylase Kinase; domain 1 772 883 - -
Sto4g0852 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 16 1090 - -
Sto4g0852 1107 Pfam Leucine Rich Repeat 362 383 IPR001611 GO:0005515
Sto4g0852 1107 SMART serkin_6 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0852 1107 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Sto4g0852 1107 ProSiteProfiles Protein kinase domain profile. 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0852 1107 SUPERFAMILY L domain-like 34 301 - -
Sto4g0852 1107 Pfam Leucine rich repeat 553 611 IPR001611 GO:0005515
Sto4g0852 1107 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Sto4g0852 1107 Pfam Protein kinase domain 808 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0852 1107 PANTHER OS07G0152200 PROTEIN 16 1090 - -
Sto4g0852 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0852 Sto-Chr4 6678885 6682796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0852 23 1084 Receptor kinase-like Gene Family AT1G73080 38.330 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto4g0852 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0852 - - gmx:100818311 1716.05