Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0849 ATGTCAGCCCCAACAGGACgcctcttgggaccaccttccctgctgTCAGCCGGCTCCGCCGGAGAAGACGGAGGCACCAGAAGCCGTCTTTCCCTCTCACTACCAGCAGGCACCACAGTAGTCCGGAccagaggaagaggaggagggGAAcagaggcaatggagaaaggtgaagGCAAGCTCAAACCCAGTTGCAACTGCCTGCCTCAACCACACACGTGGAAAaaagcaacggacgggatacataggcagggcaaaggagacgcaaagaccgaaaagcccccgcgAACCCAAGAccctctgcaaggaagccaccgtcAGCTACCAACcactggccagaggagagctcttcgaaaaaatgactaaagcagcccctgacttttggaCTCCCTTTACTAGccctcaaaggCTATCCACGAGTAGAGGCGGCAAAAAATTCCcaagtgtcttacaggcaaaAGAACTtgagccctcactcgggggacttaaggacagACATTCAACCCTGGATATACagcggctcgcccgcccggagtaccttagacacgtcttagccgcacacggcccaatacaggtaacaaccttgcctaacggctccgatagacgtcaccatgacgaactacGTTCTTTTAGAGAGAGAACTAATGAGGTTCCTTTCCAAAGAGACGTGGGGCGAGAGCCCAAACATGGGACGCGGCTTGCTCGTCCGGAGCAGATACACGTCTTGGCCGCACACGGCGACCGCAGgttgttacctaaggataagtcccccaaggtagtccctaaaccattcacggtagAATTCAGGAATAGGAGGCAAGATGCTGACGCTGACGCTGACGCTGACCAATCCATCAAAAGCCAACAACAATATACTTCAAAAACCCAGAATAAAGACGCCACGAAGTTTCAGTCTTTGAAGCCGAGCCTAATTGGAATATTCGGTGACTTTAAAGTTGGAGATGATAAAGCTGGCTTTGCTGAAAAGCTAGAAAGCTCGAAGTTGAATGGAAATAGGAAGTCTAAGACTATGAAGAGTGTGTGGCGTAAAGGGGACACAGTTGCCACTGTGCAGAAGGATGAGATTCCTGATGAGGATGCATCAGAGCTCAATGTCTCTATTCCTGGTGCTGCTTCGGGAAGGAAAGGTAGGAAATGGAGTAAAGCTAGACGAAGGGCAGCAAGACTCCAGGCAGCCAAGGAGGCTGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGATAAAGGTATGCTAATAGAGGAGTTAGCCTACAACTTGGCCATCAGTGAAGGTGAAATACTAGGTTATTTATACTCCAAGGGGATTAAACCAGATGGGGTGCAAACTTTAGACAAAGATATGGTGAAGATGATTTGTAAAGAATATAACGTTGAAATCATAGGTGCTGATCCTGTGAAAGTTGAAGAATTGGCGAAGAAAAGGGAAATTCTTGATGAAAATGACCTAGACAAACTTAAAGATAGGCCTCCTGTCATTACTATAATGGGTCATGTAGATCATGGCAAGACAACTCTTTTGGATTATATTCGAAAAAGCAAGGTAGCTGCTTCAGAAGCCGGTGGGATTACACAGGGAATTGGTGCTTATAAAGTGCAAGTACCTATTGATGGAAAACCTCTTCCTTGTGTTTTCCTTGACACTCCAGGACATGAGGCATTTGGGGCAATGCGAGCTCGTGGAGCAAGTGTGACGGACATTGCTGTCATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCCATAGCTCATGCCAAAGCAGCAGCAGTACCTATAATAGTTGCTATAAACAAGGCATGCCAACTTGACATGTCTGCATTGATAGATAAAGATGGAGCAAATCCAGAACGAGTTATGCAAGAGCTTTCTTCAATTGGTCTGATGCCGGAAGATTGGGGTGGTGATGTCCCAATAGTTCAGATAAGTGCTCTTAAAGGGGAGAATATTGATGATCTGTTGGAAACCATTATGCTTGTTGCAGAGTTGCAAGAGCTAAAAGCTAATCCTGATGGAAGTGCAAAGGGCACTGTCATTGAGGCTGGTTTGGATAAATCAAAAGGACCATTTGCCACTTTTATGGTGCAGAATGGCACCCTTAGAAGGGGAGATATAGTTGTTTGTGGAGAGGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGCTGGAAAACGTGTGGAGGTAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTTCAATTGCTGGTGATGACTTTGAGGTTGTTCACTCCCTTGATGCTGCACGTGAAAAGGCAGAGTCCCGTGCTGAGTCACTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAAGTGACTCTTTCTTCTTTAGCTTCTGCAGTTTCTTCAGGAAAGCTTTCTGGTCTAGACTTGCACCAACTAAATATTATCTTGAAGGTGGATCTTCAGGGATCCATTGAAGCTGTCAGACAAGCTTTACAGGTATTACCACAAGATAATGTCACATTGAAGTTTCTGTTGGAAGCAACAGGCGATGTAAGCTCCAGTGACGTTGACCTCGCAGTTGCAAGCAAAGCAATtgttttgggatttaatgtCAGAACACCAGGTTCTGTGAAAAGCTATGCAGAGAATAAAGGTGTGGAGATTAGATTATATAGAGTTATCTATGAACTAATCGATGATGTGCGAAATGCAATGGAAGGACTCCTGGAGCCTGTTGAGGAACAAGTAACAATTGGCTCAGTAGAAGTAAGGGCCACTTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGAGGGAAAGGTAGTAAAAGGCTGTGGAATTCGAGTCATTCATAAAGGAAAAATAGTTTATGTTGGCATTCTTGATTCTTTGAAAAGAGTGAAAGAGACAGTAAAAGAGGTAAATGCTGGTCTGGAGTGTGGAATTGGGGTGGAAGACTTTGATGACTGGGAAGAGGGAGATATTCTCGAGCCCTTCGACACACTTCAGAAGAAAAGGACCCTCGAAGAGGCATCAGAATCTATGGCAGCGGCAGTGGAAGGAGTAGGAGTTGAACTGTAA 3099 0.3846 MSAPTGRLLGPPSLLSAGSAGEDGGTRSRLSLSLPAGTTVVRTRGRGGGEQRQWRKVKASSNPVATACLNHTRGKKQRTGYIGRAKETQRPKSPREPKTLCKEATVSYQPLARGELFEKMTKAAPDFWTPFTSPQRLSTSRGGKKFPSVLQAKELEPSLGGLKDRHSTLDIQRLARPEYLRHVLAAHGPIQVTTLPNGSDRRHHDELRSFRERTNEVPFQRDVGREPKHGTRLARPEQIHVLAAHGDRRLLPKDKSPKVVPKPFTVEFRNRRQDADADADADQSIKSQQQYTSKTQNKDATKFQSLKPSLIGIFGDFKVGDDKAGFAEKLESSKLNGNRKSKTMKSVWRKGDTVATVQKDEIPDEDASELNVSIPGAASGRKGRKWSKARRRAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGYLYSKGIKPDGVQTLDKDMVKMICKEYNVEIIGADPVKVEELAKKREILDENDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPIDGKPLPCVFLDTPGHEAFGAMRARGASVTDIAVIVVAADDGIRPQTNEAIAHAKAAAVPIIVAINKACQLDMSALIDKDGANPERVMQELSSIGLMPEDWGGDVPIVQISALKGENIDDLLETIMLVAELQELKANPDGSAKGTVIEAGLDKSKGPFATFMVQNGTLRRGDIVVCGEAFGKVRALFDDAGKRVEVATPSIPVQVIGLNNVSIAGDDFEVVHSLDAAREKAESRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLEATGDVSSSDVDLAVASKAIVLGFNVRTPGSVKSYAENKGVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVTIGSVEVRATFSSGSGRVAGCMVTEGKVVKGCGIRVIHKGKIVYVGILDSLKRVKETVKEVNAGLECGIGVEDFDDWEEGDILEPFDTLQKKRTLEEASESMAAAVEGVGVEL 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0849 1032 MobiDBLite consensus disorder prediction 265 281 - -
Sto4g0849 1032 PRINTS GTP-binding elongation factor signature 498 511 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 PRINTS GTP-binding elongation factor signature 550 560 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 PRINTS GTP-binding elongation factor signature 566 577 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 PRINTS GTP-binding elongation factor signature 602 611 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 273 1022 - -
Sto4g0849 1032 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 273 1022 IPR015760 -
Sto4g0849 1032 ProSitePatterns Initiation factor 2 signature. 965 987 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto4g0849 1032 SUPERFAMILY Translation proteins 679 762 IPR009000 -
Sto4g0849 1032 MobiDBLite consensus disorder prediction 251 299 - -
Sto4g0849 1032 Gene3D - 811 916 IPR036925 -
Sto4g0849 1032 CDD IF2_eIF5B 497 672 - -
Sto4g0849 1032 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 810 922 IPR036925 -
Sto4g0849 1032 MobiDBLite consensus disorder prediction 80 98 - -
Sto4g0849 1032 SUPERFAMILY Translation proteins 918 1012 IPR009000 -
Sto4g0849 1032 TIGRFAM IF-2: translation initiation factor IF-2 416 1014 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto4g0849 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 679 IPR027417 -
Sto4g0849 1032 CDD IF2_mtIF2_II 683 777 IPR044145 -
Sto4g0849 1032 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 494 676 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 Gene3D Translation factors 679 795 - -
Sto4g0849 1032 Gene3D - 491 678 IPR027417 -
Sto4g0849 1032 Pfam Translation initiation factor IF-2, N-terminal region 419 465 IPR006847 -
Sto4g0849 1032 TIGRFAM small_GTP: small GTP-binding protein domain 496 666 IPR005225 GO:0005525
Sto4g0849 1032 Hamap Translation initiation factor IF-2 [infB]. 27 1012 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto4g0849 1032 Coils Coil 762 789 - -
Sto4g0849 1032 Pfam Elongation factor Tu GTP binding domain 499 668 IPR000795 GO:0003924|GO:0005525
Sto4g0849 1032 MobiDBLite consensus disorder prediction 282 299 - -
Sto4g0849 1032 Pfam Translation-initiation factor 2 811 904 IPR023115 -
Sto4g0849 1032 CDD mtIF2_IVc 922 1003 - -
Sto4g0849 1032 MobiDBLite consensus disorder prediction 1 98 - -
Sto4g0849 1032 Gene3D Translation factors 917 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0849 Sto-Chr4 6634233 6649039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0849 495 902 Eukaryotic Initiation Factors Gene Family AT1G76810 29.299 5.46e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0849 K02519 - gmx:100778924 1087.4