Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0846 ATGACGGTTGCCGAGCCAAGGAAAACCCCTCGACCGGGTAAGGGCGGGTTCGAAGCCCACGGGCTCTCCGAAGAGGAAGCCCGGGTTCGAGCCATTGCGGAGATCGTTAACTCCATGGTGGATCTCTCCAGAAAGGGGCAAAACGTCGACTTAAATGCACTAAAATCCGCAGCATGTCGCAAGTATGGACTTTCACGTGCACCCAAGCTCGTGGAGATGATCGCTGCACTTCCCGAGTCGGAGCGGGAGGCGCTGCTACCGAAGCTTCGAGCCAAGCCTGTCCGAACCGCCTCAGGAATAGCTGTCGTGGCTGTCATGTCCAAGCCTCACCGTTGCCCTCACATAGCTACCACTGGTAATATTTGCGTGTATTGCCCCGGAGGACCAGACTCTGATTTTGAGTACAGTACGCAGTCTTACACTGGTTACGAACCAACTAGTATGCGAGCAATTCGGGCAAGGTACAACCCATATGTCCAAGCCAGAAGCAGGATAGATCAGCTTAAGCGTTTGGGTCACAGTGTAGACAAGGTTGAGTTCATTTTGATGGGTGGTACCTTCATGTCCCTTCCGGCAGACTATCGTGATTACTTTATCCGTAATCTTCACGATGCTTTGTCTGGACACACTTCGGCAAATGTTGAAGAGGCTGTTGCATACTCTGAGCATGGTGCAACAAAGTGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTTGGGCCTCATTTGAGGCAAATGCTTTCTTATGGTTGTACAAGATTGGAGATTGGAGTACAAAGCACCTATGAGGATGTTGCTCGAGACACCAATAGAGGACATACAGTTGCTGCTGTTGCAGATTGTTTTTGCTTGGCAAAAGATGCTGGTTTTAAGGTTGTTGCTCACATGATGCCTGATCTTCCAAATGTTGGTGTTGAGAGGGACATGGAAAGTTTTCGGGAGTTTTTTGAGAGTCCCTCGTTTAGAGCAGATGGGCTTAAAATATACCCTACACTCGTAATACGCGGAACTGGTCTTTACGAGCTCTGGAAAACTGGCAGgtATAGAAATTATCCACCCGAGCAACTGGTGGACATCATAGCTAGGATCCTTGCTATGGTTCCACCTTGGACCCGTGTTTACAGAGTTCAGAGGGATATTCCCATGCCCCTTGTTACTTCTGGGGTCGAGAAAGGGAATCTAAGGGAGCTAGCTTTAGCTCGAATGGAAGACCTGGGCTTGAAATGTCGTGATGTTCGAACTCGAGAAGCTGGAATCCAGGACATTCATCACCAAATTAGGCCTGAAGAAGTGGAGCTTGTTCGTCGCGATTATATGGCAAATGAGGGTTGGGAAACATTTCTATCATATGAAGACACACGACAGGATATTCTTGTTGGTTTGCTTCGACTACGGAAATGTGGCCGGAACACTACTTGTCCAGAGCTCATGGGAAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAATTGCTGTACCAGTTCATGGACGGGATGCTGACAAGCTGCAACACCAGGGTTATGGTACACTTCTAATGGAGGAAGCAGAACGAATTGCCCGCAGGGAACATAGATCAACAAAAATAGCTGTAATTTCAGGAGTTGGCACACGTCATTATTACAGGAAATTGGGGTACGAGCTTGAAGGGCCTTACATGGTCAAATATCTGTTGGGATAA 1686 0.4786 MTVAEPRKTPRPGKGGFEAHGLSEEEARVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLSRAPKLVEMIAALPESEREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIRPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGIAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLLG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0846 561 Gene3D - 411 560 - -
Sto4g0846 561 SUPERFAMILY Radical SAM enzymes 132 371 - -
Sto4g0846 561 SFLD ELP3-like 50 559 IPR034687 -
Sto4g0846 561 SFLD elongater protein-like 50 559 - -
Sto4g0846 561 SMART MiaB 102 364 IPR006638 GO:0003824|GO:0051536
Sto4g0846 561 TIGRFAM ELP3: radical SAM enzyme/protein acetyltransferase, ELP3 family 47 559 IPR034687 -
Sto4g0846 561 PIRSF HAT_Elp3 17 560 IPR034687 -
Sto4g0846 561 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 306 555 IPR016181 -
Sto4g0846 561 ProSiteProfiles Radical SAM core domain profile. 95 385 IPR007197 GO:0003824|GO:0051536
Sto4g0846 561 CDD Radical_SAM 109 356 - -
Sto4g0846 561 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 409 561 IPR000182 GO:0016407
Sto4g0846 561 PANTHER ELONGATOR COMPLEX PROTEIN 3 3 559 IPR034687 -
Sto4g0846 561 Pfam Radical SAM superfamily 120 308 IPR007197 GO:0003824|GO:0051536
Sto4g0846 561 Pfam Acetyltransferase (GNAT) family 412 548 IPR000182 GO:0016407
Sto4g0846 561 MobiDBLite consensus disorder prediction 1 21 - -
Sto4g0846 561 Pfam Radical_SAM C-terminal domain 326 405 IPR032432 -
Sto4g0846 561 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 3 559 IPR039661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0846 Sto-Chr4 6593403 6607396 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto4g0846 Radical_SAM 2.3e-17 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0846 K07739 - gmx:100818764 1083.55