Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0829 ATGAAAGGATGCCTGAATGATGACAAGGCCACAGAAGCAACTATTGATGCAGAGGATTATCTTCATACTGGTGATATTGGCTACATAGATGCCGACGATGAGATTttcatagttgacatagttaaggaAATGAACTCATCAAATTCAAAGGCTTTTAGCCAAAAGAATGTTGTTGCCGGTGAAGTTCCAATTGCTTTGTGGTTAAGTCCAATGGCTTTGATCTTATCGAGGAGGCTGTAA 240 0.3667 MKGCLNDDKATEATIDAEDYLHTGDIGYIDADDEIFIVDIVKEMNSSNSKAFSQKNVVAGEVPIALWLSPMALILSRRL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0829 79 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 44 - -
Sto4g0829 79 Pfam AMP-binding enzyme 1 44 IPR000873 -
Sto4g0829 79 SUPERFAMILY Acetyl-CoA synthetase-like 1 44 - -
Sto4g0829 79 PANTHER 4-COUMARATE--COA LIGASE 2 1 44 - -
Sto4g0829 79 Gene3D Luciferase; Domain 3 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0829 Sto-Chr4 6373276 6373767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0829 1 44 Monolignol Biosynthesis Gene Families AT1G65060 70.455 2.19e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0829 K01904 - lja:Lj6g3v0933470.1 77.0257