Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0776 ATGACTTCAGCAGAAGATGCCACTGGTTTGACCACTAATAACGTTGTTACTGTAGTTGGAGAAGCTGTTGTACCAGCACATAATACTTGGACAGACGCTGTACCAGCACCTAATACCTGGAAAGCCGCTGTACTAGTACTTAGCACCTGGACAGACGTTGTACCAGCACCTAATACCTGGACAGCCGCTGTACCAGTACTTAGGACCTGGACAGACGCTGCACCAGTACTAATCACTGGTCACAGGCTCAATTCTTCTATTAGCACAGGATATATTGCTCAATCAGGTACTTACTCTTCTGCTATGACCACCTCTAGAACTCCCAATGACTCTTGGATTGTTGATTCTGGAGCATCGGATCATATGACTGGTAATACTTCTCTCTTCTCTAAACTTGCCCCCTGTAAAACCTCTTTGCAAGTTAAGATTGCAGATGGTACTATGGCAAAGGTGTTAGGCATTGGCTCGGTGAAAATCTGCGACACGATAACTCTTCTTAATGTTCTTCATGTTCCTACATTAGCTTGTAATTTGTTGTCTATTAGTAAGCTCACTCAAGACAACCACTGCAGTGCTAACTTTCAATCTCATAATTGTACGTTTCAGGACTTGGCATCGGGGAAGACAATTGGCCGTGCTGAGGAGTATAATGGTCTCTATCATCTTGGGTCCTCAATTTTTCCAGCCTTCAATAAAGCTGTTCTTAGAGCCAAATGCCCTCCAGACATTCTCTTATGGCACTATAGACTAGGACATCCTAATTTTCATTACATGCAAAAATTAATTGAGACCCAAACCGAATTAACAGAATTTCCAAACCCAGATTCAGTACCTCAACAACAGACCCAAACCACTCATGATAACAAATTTGGCAAAGTCTATACCAAAAGAAAAGGGATCCAAACCGAGAACCATACAACTCCTATGATGCAAACTGAGAACCCCATGTCAAGTTCTGCAGATTCCGAGGGCTCTAATGAAGGTTTTGGTGGggctggttgggtaatggaagcAGTATTTGGTTCTGAATTTGTTGGTAAAACCGTGATTGAGTTTTTAGGTATTGATGCAAAGCCATACATTTTCAGCTATTCTGAGTTAAAGAATGCCACATCTGACTTCAATCCTGGCAACAAACTTGGAGAAGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGACTCATTGCTGTGAAACAACTATCTGTGGCATCTCATCAAGGAAAGAACCAGTTCATAGCTGAGATTAACACTATATCTTCTGTGCAACATCGCAATCTTGTTAAATTACATGGGTGTTGCATTGAAGGGACAAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGTATGATGATGGTAGCTTTTTCTTCTACTTGTGTCAATGTGTGCATGCGTATGTTTGAATGCTTGTACGCCTTTGCTTTTTATCCATCCCTCTTGGTTTATGCTAATGGATATCTTGCTCCCGAGTATGCATTGCGTGGACACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCTTTAGAGATTGTTAGTGGGAGGCCTAATTCTGATTCAAGCttcgaaggagagaagatgtaTCTTCTACAATGGGCATGGCATCTGCATGAAAACAACCGTGTAATTGATCTGGTAGATCCTAGACTGTCATCAGATTTCAATGAGGAGCAAGTTAGAAGAATTGTAGGAATATCTCTTCTGTGCACTCAAGCATCACCATTGTTAAGGCCATCGATGTCCCGTGTGGTGGCGATGCTTTCTGGGGATATCGAAGTGAGCACTGTATCGTCAAAGCCCGGATACTTGACAGACTGGATATTTGATGATGCGACCAGCTTCATCACTGACTTGGAAACTAAGGAATCAGATACAAGTCAATATGACTCATTTCCAAGTACCAGCACAGTTGGTAATGCAAACCAATCACCAGTAAATGCTTCTAAACCTATCCTTCATTACACTCAGTGA 2013 0.4083 MTSAEDATGLTTNNVVTVVGEAVVPAHNTWTDAVPAPNTWKAAVLVLSTWTDVVPAPNTWTAAVPVLRTWTDAAPVLITGHRLNSSISTGYIAQSGTYSSAMTTSRTPNDSWIVDSGASDHMTGNTSLFSKLAPCKTSLQVKIADGTMAKVLGIGSVKICDTITLLNVLHVPTLACNLLSISKLTQDNHCSANFQSHNCTFQDLASGKTIGRAEEYNGLYHLGSSIFPAFNKAVLRAKCPPDILLWHYRLGHPNFHYMQKLIETQTELTEFPNPDSVPQQQTQTTHDNKFGKVYTKRKGIQTENHTTPMMQTENPMSSSADSEGSNEGFGGAGWVMEAVFGSEFVGKTVIEFLGIDAKPYIFSYSELKNATSDFNPGNKLGEGGFGPVYKGTLNDGRLIAVKQLSVASHQGKNQFIAEINTISSVQHRNLVKLHGCCIEGTKRLLVYEYLENKSLDQALFGMMMVAFSSTCVNVCMRMFECLYAFAFYPSLLVYANGYLAPEYALRGHLTEKADVFSFGVVALEIVSGRPNSDSSFEGEKMYLLQWAWHLHENNRVIDLVDPRLSSDFNEEQVRRIVGISLLCTQASPLLRPSMSRVVAMLSGDIEVSTVSSKPGYLTDWIFDDATSFITDLETKESDTSQYDSFPSTSTVGNANQSPVNASKPILHYTQ 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0776 670 MobiDBLite consensus disorder prediction 304 327 - -
Sto4g0776 670 Pfam GAG-pre-integrase domain 218 264 IPR025724 -
Sto4g0776 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 337 475 - -
Sto4g0776 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 497 656 - -
Sto4g0776 670 ProSiteProfiles Protein kinase domain profile. 374 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0776 670 PANTHER BNAC03G71060D PROTEIN 497 656 - -
Sto4g0776 670 PANTHER BNAC03G71060D PROTEIN 337 475 - -
Sto4g0776 670 SUPERFAMILY Protein kinase-like (PK-like) 358 628 IPR011009 -
Sto4g0776 670 Gene3D Phosphorylase Kinase; domain 1 344 449 - -
Sto4g0776 670 MobiDBLite consensus disorder prediction 638 670 - -
Sto4g0776 670 Pfam Protein tyrosine and serine/threonine kinase 498 601 IPR001245 GO:0004672|GO:0006468
Sto4g0776 670 Pfam Protein tyrosine and serine/threonine kinase 377 459 IPR001245 GO:0004672|GO:0006468
Sto4g0776 670 Gene3D Transferase(Phosphotransferase) domain 1 486 616 - -
Sto4g0776 670 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0776 Sto-Chr4 5541994 5555407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0776 351 668 Receptor kinase-like Gene Family AT1G56120 51.791 2.19e-106 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g0776 PK_Tyr_Ser-Thr 6.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0776 - - gmx:100780567 442.58