Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0745 TTGGAAGCAGGAGGAGGAGGAGTGGCCGTCCTTTCCAATCCTGTGAACACCGTCGATTCTTCCTCGCCTTCGTCCCCTGCATCCAATGGTGGCTTGAACTGCTCTAATAAACTGGAGTCGCccattttgattttcttgttctttcACAAAGCGATTCGGAATGAGCTTGATGGTCTCCATCGATTAGCTATGGCATTTGCAACGGGAAATCGCTCCGACATTCAGCCGCTCTTCGAACGCTGTCGTTTCCTCAGATCCATTTATAGACACCACTCCCATGCTGAAGATGAGGTGATATTTCCTGCACTTGATATACGTGTGAAGAATGTTGCACAGACATATTCTCTTGAACACAAGAGCGAAAGCAATCTATTTGATCACCTATTTGAGCTTTTAAATTCTACCATCCAGAATGATGAAAGCTTCTCAAAGGAGTTAGCATCCTGCACAGGAGCTCTGCACACATCAATTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTGCTTATTGAGAAATTCTCGCTTGAGGAACAGTCATCTCTGGTTTGGCAATTTCTTTGCAGTATTCCTGTTGATACAATGGCCAAGTTTCTTCCCTGGCTTTCAACATCTATATCACCTGATGAATCTAAGGATCTAGAAAATTGCTTAAGCAAGATAGTGCCCGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGGAGAAGTGGTGCTAGTACAGTTGAAAGTTGCATAGATCATTCTCAGGTTCAATGCAATCCAAGGCCATTAACCCATCTGATTGAGAAACCAAACTGTGCATGTGAGTCGGCAACAACTGGGAAAAGGAAATATTCTGAATCTATTCTGGATGTTTCTGATACCACTGGAACACATCCTATAGATGAAATATTACTCTGGCATAATGCGATAAAAAAAGAGTTACATGAGATAGCAGTGGAGACCAGAAAGATACAACTTTCTGGAGATTTTACTAATTTGTCAGCTTTTAATGACAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCAGCAGTAGATGGAGAACTTTCTTTCCTTCAGGAGCATGCAGAAGAAGAAAGCCAATTTAATGACTTCCGGTGTTTGATTGAAGGTATTCAGAGTGAAGGAGCAACATCAAATTCAGAAGCTGAATTTTATTCCAAGTTATGCTCGCATGCTGATCATATAATGGAAACCATACAGAGGCATTTTCGCAATGAAGAAGTTCAGGTTCTTCCGCTTGCTCGGAAGCACTTCAGCTTCAAAAGGCAACGTGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTGGTAGGGTCATTAACTGAGGATGAAGCAAAGATGTTTTTGAAAAACATGCAACTGGCAGCTCCTAAATTGGATTCTGCTCTGGTCACACTCTTCTGTGGTTGGGCTTGCAAAGCCCGGAAGAAGGCTCTGTGCTTGTCTTCCGGTGCATCAGGTTGCTGTCCTGCTAAAGAACTTGCTGATATTGAAGAAAATTGCATTCAGTCATCGTGTGCTTGTGCATCTGCTTCTTCAACATCTGCTAGTGGTGGCTCCATGTCAGCTAAATCAGATGAGAGGAAGAGACCAGTCAAGCGAAACATATCAGACTTCTACAAGAATGGAGATATCCTTGAATCTTCGGAGACTGAAAGTATCCAAAAACAATGTTGTAGTGGTCAGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATCTGGGGCTGAGTTCTCTTTCTACTGCAAGGTCTTTACGCTCCTTGTCTTTCAGCTCCTCCCCTCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGATAACTCATGTGAAGCTGGTTCTGCAGAAAGACCAATTGATACTATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGGAAGCTTAGTGATTGTGATGAGAGAATTCTTCGTCAATTTACTGGAAGATTTCGCCTTCTATGGGGTTTATATAGAGCTCATAGTAACGCTGAAGATGATATAGTATTTCCAGCATTGGAATCCAAAGAGGCACTTCATAACGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAGGAtatttcttgtgttctttctgaGCTTTCTGTCCTTAACGAAAGTTTGCAGATAATCAATATGTCAGAGAATACGAGTACATGTAATCTGGAAACTTCTGATGCCAGTATTAGTGATAATATCAGAAAGTATAATGAGCTAGCAACTAAACTTCAAGGTATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATGTTTTCAGAGAAGAGCGTGAGCTCTGGCCATTGTTTGCTAGGCATTTCACAGTGGAAGAACAAGACAAGATAGTAGGCCGGATAATTGGAACTACTGGTGCTGAAGTTCTTCAATCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAAGCAGCTAAGAACACTATGTTCAATGAATGGCTCAACGAATGCTGGAAAGAGAGTCCACCATCTATCTCCTTGACTGAAACATCTGAGAATGGAACTTCCCAAAGTGGTACTGAATATCAAGAAAGCTTGGACATGAATGATCAGATTTTCAAGCCAGGTTGGAAAGATATATTCCGGATGAATCAGAATGAGCTTGAGTCAGAGATACGGAAGGTTTATCGGGATTCAACTCTTGATCCAAGGAGAAAGGCATACCTTGTGCAGAATCTAATGACTAGTCGCTGGATTGCCTCCCAGCAGAAGTTACCTAAAGCTGTACCTGGAGAATCCTCTAATGGTGAAGAAGTAGAAGGACGGTCACCATCATTTCGGGACCCAGAGAGAAAAGAATTTGGGTGTGAGCATTataagagaaactgcaaacttCGAACTGCATGTTGTGGCAAGTTGTTTACATGCAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACGATGGAAATGATGTGTATGCAATGCCTGAATATACAAGCGGTTGGGCCTATATGCATGACCCCTTCTTGTAATGGACTTTCAATGGCAAAATATTATTGCAacatatgtaaattttttgATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTATGCCGTGTGGGCAGAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATTAAATCGGCATCTCACAAGTGCCTGGAGAAAGGTTTGGAAATGAACTGTCCAATTTGCTGTGACTTCTTATTCACATCAAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACCTGCAGTCACTACACATGTCCAATTTGCAGCAAGTCATTGGGAGATATGGCAGTTTACTTTGGTATGCTTGATGCTTTATTGGCTGCTGAGGAGCTTCCTGAAGAGTACAGGGACCGTTATCAGTTTTTGGACTGGAAATGCAGGATATTTTGTGCCATGACTGTGATCGAAAGGGCACTTCACGCTTCCACTGGTTATACCACAAATGTGGATTTTGTGGTTCGTACAATACGCGGGTGA 3708 0.4105 LEAGGGGVAVLSNPVNTVDSSSPSSPASNGGLNCSNKLESPILIFLFFHKAIRNELDGLHRLAMAFATGNRSDIQPLFERCRFLRSIYRHHSHAEDEVIFPALDIRVKNVAQTYSLEHKSESNLFDHLFELLNSTIQNDESFSKELASCTGALHTSISQHMAKEEEQVFPLLIEKFSLEEQSSLVWQFLCSIPVDTMAKFLPWLSTSISPDESKDLENCLSKIVPEEKLLQKVIFTWMEGRSGASTVESCIDHSQVQCNPRPLTHLIEKPNCACESATTGKRKYSESILDVSDTTGTHPIDEILLWHNAIKKELHEIAVETRKIQLSGDFTNLSAFNDRLQFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCSHADHIMETIQRHFRNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPKLDSALVTLFCGWACKARKKALCLSSGASGCCPAKELADIEENCIQSSCACASASSTSASGGSMSAKSDERKRPVKRNISDFYKNGDILESSETESIQKQCCSGQSCCVPGLGVSSNNLGLSSLSTARSLRSLSFSSSPPSLNSSLFIWETDNSCEAGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDCDERILRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCVLSELSVLNESLQIINMSENTSTCNLETSDASISDNIRKYNELATKLQGMCKSIRVTLDQHVFREERELWPLFARHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQAAKNTMFNEWLNECWKESPPSISLTETSENGTSQSGTEYQESLDMNDQIFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKLPKAVPGESSNGEEVEGRSPSFRDPERKEFGCEHYKRNCKLRTACCGKLFTCRFCHDNVSDHSMDRKATMEMMCMQCLNIQAVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQFLDWKCRIFCAMTVIERALHASTGYTTNVDFVVRTIRG 1235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0745 1235 CDD Hr-like 301 430 - -
Sto4g0745 1235 SUPERFAMILY RING/U-box 1121 1176 - -
Sto4g0745 1235 MobiDBLite consensus disorder prediction 539 558 - -
Sto4g0745 1235 Pfam Ring finger domain 1123 1165 IPR001841 -
Sto4g0745 1235 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 27 1198 - -
Sto4g0745 1235 Gene3D nmb1532 protein domain like 301 448 - -
Sto4g0745 1235 Gene3D nmb1532 protein domain like 39 190 - -
Sto4g0745 1235 CDD Hr-like 650 810 - -
Sto4g0745 1235 ProSiteProfiles Zinc finger CTCHY-type profile. 1060 1123 IPR017921 -
Sto4g0745 1235 MobiDBLite consensus disorder prediction 12 31 - -
Sto4g0745 1235 Gene3D nmb1532 protein domain like 643 877 - -
Sto4g0745 1235 SUPERFAMILY CHY zinc finger-like 988 1051 IPR037274 GO:0008270
Sto4g0745 1235 ProSiteProfiles Zinc finger CHY-type profile. 988 1057 IPR008913 GO:0008270
Sto4g0745 1235 Pfam Hemerythrin HHE cation binding domain 298 432 IPR012312 -
Sto4g0745 1235 Pfam Hemerythrin HHE cation binding domain 46 172 IPR012312 -
Sto4g0745 1235 Pfam Hemerythrin HHE cation binding domain 648 811 IPR012312 -
Sto4g0745 1235 SUPERFAMILY Zinc hairpin stack 1061 1117 IPR037275 -
Sto4g0745 1235 MobiDBLite consensus disorder prediction 13 31 - -
Sto4g0745 1235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1118 1220 IPR013083 -
Sto4g0745 1235 SMART ring_2 1124 1165 IPR001841 -
Sto4g0745 1235 Pfam CHY zinc finger 995 1070 IPR008913 GO:0008270
Sto4g0745 1235 PANTHER CHY ZINC FINGER PROTEIN 27 1198 - -
Sto4g0745 1235 CDD RING-H2_Pirh2 1123 1166 - -
Sto4g0745 1235 ProSiteProfiles Zinc finger RING-type profile. 1124 1166 IPR001841 -
Sto4g0745 1235 MobiDBLite consensus disorder prediction 963 988 - -
Sto4g0745 1235 MobiDBLite consensus disorder prediction 881 902 - -
Sto4g0745 1235 CDD Hr-like 44 170 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto4g0745 Sto-Chr4 5099167 5113724 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0745 4 1197 C2H2 Transcription Factor Family AT3G18290 67.718 0.0 1627
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0745 K16276 - gmx:100803002 1971.82