Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto4g0745 | TTGGAAGCAGGAGGAGGAGGAGTGGCCGTCCTTTCCAATCCTGTGAACACCGTCGATTCTTCCTCGCCTTCGTCCCCTGCATCCAATGGTGGCTTGAACTGCTCTAATAAACTGGAGTCGCccattttgattttcttgttctttcACAAAGCGATTCGGAATGAGCTTGATGGTCTCCATCGATTAGCTATGGCATTTGCAACGGGAAATCGCTCCGACATTCAGCCGCTCTTCGAACGCTGTCGTTTCCTCAGATCCATTTATAGACACCACTCCCATGCTGAAGATGAGGTGATATTTCCTGCACTTGATATACGTGTGAAGAATGTTGCACAGACATATTCTCTTGAACACAAGAGCGAAAGCAATCTATTTGATCACCTATTTGAGCTTTTAAATTCTACCATCCAGAATGATGAAAGCTTCTCAAAGGAGTTAGCATCCTGCACAGGAGCTCTGCACACATCAATTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTGCTTATTGAGAAATTCTCGCTTGAGGAACAGTCATCTCTGGTTTGGCAATTTCTTTGCAGTATTCCTGTTGATACAATGGCCAAGTTTCTTCCCTGGCTTTCAACATCTATATCACCTGATGAATCTAAGGATCTAGAAAATTGCTTAAGCAAGATAGTGCCCGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGGAGAAGTGGTGCTAGTACAGTTGAAAGTTGCATAGATCATTCTCAGGTTCAATGCAATCCAAGGCCATTAACCCATCTGATTGAGAAACCAAACTGTGCATGTGAGTCGGCAACAACTGGGAAAAGGAAATATTCTGAATCTATTCTGGATGTTTCTGATACCACTGGAACACATCCTATAGATGAAATATTACTCTGGCATAATGCGATAAAAAAAGAGTTACATGAGATAGCAGTGGAGACCAGAAAGATACAACTTTCTGGAGATTTTACTAATTTGTCAGCTTTTAATGACAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCAGCAGTAGATGGAGAACTTTCTTTCCTTCAGGAGCATGCAGAAGAAGAAAGCCAATTTAATGACTTCCGGTGTTTGATTGAAGGTATTCAGAGTGAAGGAGCAACATCAAATTCAGAAGCTGAATTTTATTCCAAGTTATGCTCGCATGCTGATCATATAATGGAAACCATACAGAGGCATTTTCGCAATGAAGAAGTTCAGGTTCTTCCGCTTGCTCGGAAGCACTTCAGCTTCAAAAGGCAACGTGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTGGTAGGGTCATTAACTGAGGATGAAGCAAAGATGTTTTTGAAAAACATGCAACTGGCAGCTCCTAAATTGGATTCTGCTCTGGTCACACTCTTCTGTGGTTGGGCTTGCAAAGCCCGGAAGAAGGCTCTGTGCTTGTCTTCCGGTGCATCAGGTTGCTGTCCTGCTAAAGAACTTGCTGATATTGAAGAAAATTGCATTCAGTCATCGTGTGCTTGTGCATCTGCTTCTTCAACATCTGCTAGTGGTGGCTCCATGTCAGCTAAATCAGATGAGAGGAAGAGACCAGTCAAGCGAAACATATCAGACTTCTACAAGAATGGAGATATCCTTGAATCTTCGGAGACTGAAAGTATCCAAAAACAATGTTGTAGTGGTCAGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGCAGTAATAATCTGGGGCTGAGTTCTCTTTCTACTGCAAGGTCTTTACGCTCCTTGTCTTTCAGCTCCTCCCCTCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGATAACTCATGTGAAGCTGGTTCTGCAGAAAGACCAATTGATACTATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGGAAGCTTAGTGATTGTGATGAGAGAATTCTTCGTCAATTTACTGGAAGATTTCGCCTTCTATGGGGTTTATATAGAGCTCATAGTAACGCTGAAGATGATATAGTATTTCCAGCATTGGAATCCAAAGAGGCACTTCATAACGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAGGAtatttcttgtgttctttctgaGCTTTCTGTCCTTAACGAAAGTTTGCAGATAATCAATATGTCAGAGAATACGAGTACATGTAATCTGGAAACTTCTGATGCCAGTATTAGTGATAATATCAGAAAGTATAATGAGCTAGCAACTAAACTTCAAGGTATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATGTTTTCAGAGAAGAGCGTGAGCTCTGGCCATTGTTTGCTAGGCATTTCACAGTGGAAGAACAAGACAAGATAGTAGGCCGGATAATTGGAACTACTGGTGCTGAAGTTCTTCAATCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAAGCAGCTAAGAACACTATGTTCAATGAATGGCTCAACGAATGCTGGAAAGAGAGTCCACCATCTATCTCCTTGACTGAAACATCTGAGAATGGAACTTCCCAAAGTGGTACTGAATATCAAGAAAGCTTGGACATGAATGATCAGATTTTCAAGCCAGGTTGGAAAGATATATTCCGGATGAATCAGAATGAGCTTGAGTCAGAGATACGGAAGGTTTATCGGGATTCAACTCTTGATCCAAGGAGAAAGGCATACCTTGTGCAGAATCTAATGACTAGTCGCTGGATTGCCTCCCAGCAGAAGTTACCTAAAGCTGTACCTGGAGAATCCTCTAATGGTGAAGAAGTAGAAGGACGGTCACCATCATTTCGGGACCCAGAGAGAAAAGAATTTGGGTGTGAGCATTataagagaaactgcaaacttCGAACTGCATGTTGTGGCAAGTTGTTTACATGCAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACGATGGAAATGATGTGTATGCAATGCCTGAATATACAAGCGGTTGGGCCTATATGCATGACCCCTTCTTGTAATGGACTTTCAATGGCAAAATATTATTGCAacatatgtaaattttttgATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTATGCCGTGTGGGCAGAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATTAAATCGGCATCTCACAAGTGCCTGGAGAAAGGTTTGGAAATGAACTGTCCAATTTGCTGTGACTTCTTATTCACATCAAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACCTGCAGTCACTACACATGTCCAATTTGCAGCAAGTCATTGGGAGATATGGCAGTTTACTTTGGTATGCTTGATGCTTTATTGGCTGCTGAGGAGCTTCCTGAAGAGTACAGGGACCGTTATCAGTTTTTGGACTGGAAATGCAGGATATTTTGTGCCATGACTGTGATCGAAAGGGCACTTCACGCTTCCACTGGTTATACCACAAATGTGGATTTTGTGGTTCGTACAATACGCGGGTGA | 3708 | 0.4105 | LEAGGGGVAVLSNPVNTVDSSSPSSPASNGGLNCSNKLESPILIFLFFHKAIRNELDGLHRLAMAFATGNRSDIQPLFERCRFLRSIYRHHSHAEDEVIFPALDIRVKNVAQTYSLEHKSESNLFDHLFELLNSTIQNDESFSKELASCTGALHTSISQHMAKEEEQVFPLLIEKFSLEEQSSLVWQFLCSIPVDTMAKFLPWLSTSISPDESKDLENCLSKIVPEEKLLQKVIFTWMEGRSGASTVESCIDHSQVQCNPRPLTHLIEKPNCACESATTGKRKYSESILDVSDTTGTHPIDEILLWHNAIKKELHEIAVETRKIQLSGDFTNLSAFNDRLQFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCSHADHIMETIQRHFRNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPKLDSALVTLFCGWACKARKKALCLSSGASGCCPAKELADIEENCIQSSCACASASSTSASGGSMSAKSDERKRPVKRNISDFYKNGDILESSETESIQKQCCSGQSCCVPGLGVSSNNLGLSSLSTARSLRSLSFSSSPPSLNSSLFIWETDNSCEAGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDCDERILRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCVLSELSVLNESLQIINMSENTSTCNLETSDASISDNIRKYNELATKLQGMCKSIRVTLDQHVFREERELWPLFARHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQAAKNTMFNEWLNECWKESPPSISLTETSENGTSQSGTEYQESLDMNDQIFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKLPKAVPGESSNGEEVEGRSPSFRDPERKEFGCEHYKRNCKLRTACCGKLFTCRFCHDNVSDHSMDRKATMEMMCMQCLNIQAVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQFLDWKCRIFCAMTVIERALHASTGYTTNVDFVVRTIRG | 1235 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto4g0745 | 1235 | CDD | Hr-like | 301 | 430 | - | - | |
Sto4g0745 | 1235 | SUPERFAMILY | RING/U-box | 1121 | 1176 | - | - | |
Sto4g0745 | 1235 | MobiDBLite | consensus disorder prediction | 539 | 558 | - | - | |
Sto4g0745 | 1235 | Pfam | Ring finger domain | 1123 | 1165 | IPR001841 | - | |
Sto4g0745 | 1235 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 27 | 1198 | - | - | |
Sto4g0745 | 1235 | Gene3D | nmb1532 protein domain like | 301 | 448 | - | - | |
Sto4g0745 | 1235 | Gene3D | nmb1532 protein domain like | 39 | 190 | - | - | |
Sto4g0745 | 1235 | CDD | Hr-like | 650 | 810 | - | - | |
Sto4g0745 | 1235 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1060 | 1123 | IPR017921 | - | |
Sto4g0745 | 1235 | MobiDBLite | consensus disorder prediction | 12 | 31 | - | - | |
Sto4g0745 | 1235 | Gene3D | nmb1532 protein domain like | 643 | 877 | - | - | |
Sto4g0745 | 1235 | SUPERFAMILY | CHY zinc finger-like | 988 | 1051 | IPR037274 | GO:0008270 | |
Sto4g0745 | 1235 | ProSiteProfiles | Zinc finger CHY-type profile. | 988 | 1057 | IPR008913 | GO:0008270 | |
Sto4g0745 | 1235 | Pfam | Hemerythrin HHE cation binding domain | 298 | 432 | IPR012312 | - | |
Sto4g0745 | 1235 | Pfam | Hemerythrin HHE cation binding domain | 46 | 172 | IPR012312 | - | |
Sto4g0745 | 1235 | Pfam | Hemerythrin HHE cation binding domain | 648 | 811 | IPR012312 | - | |
Sto4g0745 | 1235 | SUPERFAMILY | Zinc hairpin stack | 1061 | 1117 | IPR037275 | - | |
Sto4g0745 | 1235 | MobiDBLite | consensus disorder prediction | 13 | 31 | - | - | |
Sto4g0745 | 1235 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1118 | 1220 | IPR013083 | - | |
Sto4g0745 | 1235 | SMART | ring_2 | 1124 | 1165 | IPR001841 | - | |
Sto4g0745 | 1235 | Pfam | CHY zinc finger | 995 | 1070 | IPR008913 | GO:0008270 | |
Sto4g0745 | 1235 | PANTHER | CHY ZINC FINGER PROTEIN | 27 | 1198 | - | - | |
Sto4g0745 | 1235 | CDD | RING-H2_Pirh2 | 1123 | 1166 | - | - | |
Sto4g0745 | 1235 | ProSiteProfiles | Zinc finger RING-type profile. | 1124 | 1166 | IPR001841 | - | |
Sto4g0745 | 1235 | MobiDBLite | consensus disorder prediction | 963 | 988 | - | - | |
Sto4g0745 | 1235 | MobiDBLite | consensus disorder prediction | 881 | 902 | - | - | |
Sto4g0745 | 1235 | CDD | Hr-like | 44 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto4g0745 | Sto-Chr4 | 5099167 | 5113724 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto4g0745 | 4 | 1197 | C2H2 Transcription Factor Family | AT3G18290 | 67.718 | 0.0 | 1627 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto4g0745 | K16276 | - | gmx:100803002 | 1971.82 |