Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0744 ATGGGTTGTGAGGCGTTGGCAAGTTACCGCTTCTGTCAACTAAATGCTGAAGATGAAGATAAGAAAGTGTGTGAGTTCGTCTCTGCGTTTGGGGGCTGGAATTGGAATTCCTTTGAAAATCATATCCCCTCAGAAGTTTGCCTTAAGTTGTGTTCTATCCCTCCTCCTTGGCTTAATGGCAGGAATGATAATCCTACTTGGAGTTTGACCAAGGATGGGGAATTTAGCACTAAGACCGCCTATAGTTTAATTCATGGAAATCTATCTTTTGATGGCAACAGCTCGTGGAGCAAGATTTGGGCCTGGAAGGGTCCACagaagataaaatattttatttgTATGAATTTGGGAGAATGGATTCATCTCAACTTGTCTAAGTCTATGGGGTGCTTTGACTTAGAGTGGCACTTCACCTTTCGGTTGACTGTTTGGTCTATATGGAAGGAAAGGAATAGAGTGGTCTTTGAGGACGCTGCGACTCAAGGGGCGGATATGGTCATGAGCATTGTCATGCAAGCGAAAAAGTACCTCAAAGCAAGGTTGAAGGCGAAGGAGGATGTGCACATCAAGAGGAGCAATGCTGAGGTGATTAACAGGTGGGAGAAGCCCCCAAATGGCTTGTCTAGTCTGGACCTTGCATGGAGTATCGGTTTGAAGAGGATCCTATTAAACAGTGACTCTGAGTGTGCTGTCAAGCTGATTAGGGAAGGCTTTTCACAAAACCACCCCAGTTCTTCTCTCCTTGAGCTCATTAGCCAGTTCCTCATCAATGAATGGGAGGTGGTTATTTCGTATGTTAGAAGGGAAGCCAATCATGTGGCTGATGGGATATGCAAGAACGCTACCATTCAGGTTAGAGAGAGTTGTATCTTCAATGAGCCCGCTGACTCTATTCGTGAGGCCATCAGTAGGGATGTTGTTGGGATAGCTGCGCTCTGGTTAAGGCGTGTTAGTAGAATTGGTGCGCAATCTATGAGGTCTGTGTGTTGGCTATGCCCTTGCTTGGACAAGAGGCTCAAGACCAACGCAGCCTCTGCATCTTCCTCGGACCAACGTGCACAATCCCAGGATTCAGCCGACACGTGGGAGATCTTCTTCGACCTCCGCACTCTGCAAGTTGCCACCAACTTCTTCTCCGAGTTGAACCAGTTGGGTCATGGAGGGTTTGGTCCTGTCTACAagACATCCTCATTCCTTATGCTTTATATTATGGATGAATATTGTAGTGGTTACATGGCCCCTGAATATGCATTGCGTGGATATCTATCTGTGAAGACAGATGTTTTCAGTTATGGAGTCTTGGTGTTAGAAATTGTTAGTGGGAGAAAGAACAACAACCGGCAGCTTGATGAAGAACAAGAAGATCTCTTAAACTATAATAAGAAGGTCCAAGAGATGAAGGCATGGATGCTGTATCAGACAGGGAAGATAATGAATTTAATAGACACAAGCCTTGGCAAATACAATAGCGACGAGGCAGCGATGTGCATTCAGCTGGGTTTGTTGTGCTGTCAAGCTAATATATCAGATAGACCTGACATGAATGCTGTTCATCTGATGCTGTCAAGTGACTCATTCACTTTGCCAAGACCTGGTAAACCGGGAATCCATGGCCGTGTGGGACGTTGGACGGCAACATCAACTTCTACTTTCACCAATACAAATGCAACAAGTGCAACCAGAGCTTCTGGAGGTAGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATCTCTACTTCATCCTTTGATGAAGGCAGATGA 1761 0.4475 MGCEALASYRFCQLNAEDEDKKVCEFVSAFGGWNWNSFENHIPSEVCLKLCSIPPPWLNGRNDNPTWSLTKDGEFSTKTAYSLIHGNLSFDGNSSWSKIWAWKGPQKIKYFICMNLGEWIHLNLSKSMGCFDLEWHFTFRLTVWSIWKERNRVVFEDAATQGADMVMSIVMQAKKYLKARLKAKEDVHIKRSNAEVINRWEKPPNGLSSLDLAWSIGLKRILLNSDSECAVKLIREGFSQNHPSSSLLELISQFLINEWEVVISYVRREANHVADGICKNATIQVRESCIFNEPADSIREAISRDVVGIAALWLRRVSRIGAQSMRSVCWLCPCLDKRLKTNAASASSSDQRAQSQDSADTWEIFFDLRTLQVATNFFSELNQLGHGGFGPVYKTSSFLMLYIMDEYCSGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNNNRQLDEEQEDLLNYNKKVQEMKAWMLYQTGKIMNLIDTSLGKYNSDEAAMCIQLGLLCCQANISDRPDMNAVHLMLSSDSFTLPRPGKPGIHGRVGRWTATSTSTFTNTNATSATRASGGSSFVEDYSRNSISTSSFDEGR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0744 586 Pfam Protein tyrosine and serine/threonine kinase 409 468 IPR001245 GO:0004672|GO:0006468
Sto4g0744 586 Pfam Reverse transcriptase-like 210 281 IPR002156 GO:0003676|GO:0004523
Sto4g0744 586 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 409 584 - -
Sto4g0744 586 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 328 394 - -
Sto4g0744 586 Coils Coil 442 462 - -
Sto4g0744 586 CDD RNase_H_like 210 279 IPR044730 -
Sto4g0744 586 Gene3D - 207 282 IPR036397 GO:0003676
Sto4g0744 586 Gene3D Phosphorylase Kinase; domain 1 338 396 - -
Sto4g0744 586 Gene3D Transferase(Phosphotransferase) domain 1 397 527 - -
Sto4g0744 586 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 409 584 - -
Sto4g0744 586 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 328 394 - -
Sto4g0744 586 SUPERFAMILY Protein kinase-like (PK-like) 410 552 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0744 Sto-Chr4 5068161 5085710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0744 410 536 Receptor kinase-like Gene Family AT4G21410 48.062 7.10e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g0744 PK_Tyr_Ser-Thr 1.9e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0744 - - aprc:113868075 257.299