Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0733 ATGTCAGATCTCGATCCGTCCAAGAAAGTGTCCGATAGATATCTCAAGCGTGAAGTCCTTGGTGAAGGTACCTACGGAGTAGTATACAAAGCCATTGATACCCAGACAGGACAGACAGTTGCAATTAAGAAAATTCGACTTGGCAAGCAGAAGGAAGGGATAAATTTTACAGCTCTGAGAGAGATTAAAATACTTAAAGAGCTCAAAGATCCAAACATTATTGAGTTAATTGATGCATTCCCACATAAAGGAAATTTGCATCTTGTCTTCGAATTCATGGAGACGGACCTTGAAGCTGTCATACGAGACCGAAATATCTTTCTTTCTCCTGCGGATATAAAATCTTACCTTCAAATGACGCTAAAAGGTCTTGCTTATTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAACAACTTGTTGATAGGACCTAATGGACAGCTGAAGCTTGCAGATTTTGGTTTAGCTCGGATCTTCGGGAGTCCAGATCGAAGATTTACTCATCAGAGAAGTGGAGTACCATATGTTGAATTTGTGTTTGCTCGATGGTATAGATCACCTGAGCTATTATTTGGTACCAAGCAATATGGTTCAGGCGTAGATGTTTGGGCTGCAGCTTGTATATTTGCTGAACTTCTTCTTCGTCGACCTTTTTTGCAGGGTTCAAGCGACATTGATCAATTAGGTAAGATTTTTGCAGCATTTGGGACTCCAACACCTTCTCAGTGGCCAGATCTGGTATACCTTCCTGATTATGTAGAATATCAATTTGTTCCTGCCCCTCCTTTGCGATCTTTGTTTCCAATGGCCAGTGATGATGCTTTAGATCTGTTGTCAAAGATGTTTACCTATGATCCAAAAGCTAGAATTTCAGTGAAGCAGGCATTAGAGCACAGGTATTTTTCTTCAGCTCCTTTGCCCACAGAACCATATAAACTCCCCAGACCTGCCCCTAAGAAGGAATCTAAGGCTTCTGATTTCAATCCTCACGAGGGTCCTACTGTGTTATCACCTCCAAGAAAGTCTAGGAGAGTGATGCCAGTTCTCTGGGCGTAA 1062 0.4181 MSDLDPSKKVSDRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGINFTALREIKILKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQRSGVPYVEFVFARWYRSPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDLVYLPDYVEYQFVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVKQALEHRYFSSAPLPTEPYKLPRPAPKKESKASDFNPHEGPTVLSPPRKSRRVMPVLWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0733 353 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Sto4g0733 353 SUPERFAMILY Protein kinase-like (PK-like) 10 310 IPR011009 -
Sto4g0733 353 CDD STKc_CDK7 13 316 IPR037770 GO:0005675|GO:0008353|GO:0070985
Sto4g0733 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Sto4g0733 353 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Sto4g0733 353 MobiDBLite consensus disorder prediction 309 353 - -
Sto4g0733 353 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 349 - -
Sto4g0733 353 ProSiteProfiles Protein kinase domain profile. 14 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0733 353 Gene3D Transferase(Phosphotransferase) domain 1 95 319 - -
Sto4g0733 353 SMART serkin_6 14 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0733 353 PANTHER CELL DIVISION PROTEIN KINASE 9 349 - -
Sto4g0733 353 Pfam Protein kinase domain 16 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0733 Sto-Chr4 4950285 4954273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0733 8 349 Core Cell Cycle Gene Families AT1G18040 80.702 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Sto4g0733 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0733 K02202 - mnt:21388634 652.899