Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0712 ATGGATCCAACCTCGATGCAACCTCTGGCCACCATCGCCTCCGTTGTCGCTACATCAAACGTACGAAACAACAACATTGCAGTGACCCGTGGAACTCCAAACCATCCTACTTATAAAGAGATGATACGCAATGCAATCGCGACTCTGAAGGAGAGAAAGGGGTCCAGCAAGAGAGCTATCGCCAAGTACATAGAGAAAACCTTCACCCACCTCCCCACCACTCACTCCGCCTTGTTGTCTGTCCATTTGAAGCGCTTGAAGAGCCAAGGTGTCCTCATCATGGTCAAGAAATCTTACAAGCTCGCTAGATCTAATGCTTCCTCTCCTTCCGCCCAACCCAAACGTGGTCGACCCTGCAAGCCCAAGCCCAACCTAGAACAAGCCCAACCACTAGAGGTTCGTCGCAATACGAAGCAATTGTTGGTGGCGCTTGGGCTTGAAGATGAGCCCGCAAGCTCTGGTGTGAAAAGAGGCCCAGGTCGTCCACCCAAGGAGAGGGCAATGGAAGTGAGTGAACCTAGGATTCGTCGGTCAATTCGAGTCAAAACGGAGCCCGAACGTcatcccaaacccaaatccattTATGAAATTCCTAATGGGCCTAAGAGGGGTGTAGGTCGCCCTCCTAAAAATCAATCTAACGTACCTATCATCCCTTTTGCGCCGACTGTAACTGTACCAGTCATGCCTATTGCACATCCAAGAGGCAAAGGGCATCCAAAGAAAATTAATGCAGCTACAGTGTCACATTCGGGAGATGTGCCACAAGCTATTGGAGGTGGTCGTGGGCGAGGGCGGGGGATATCGGCCGGAAGCACTGTCCTTTTCATGTCTTTAGATGAGGAACAAGCTACATCTGATAGCGATGACCTGAGGAGGAAACTTCGATATTTTCAATCAAAAGTCAGGGAATCTCTTGTTCCAATTAAGGGCATAATTCAAGAATTGGAGACGCTGGCATCAATAGACCTTAATTAG 978 0.4836 MDPTSMQPLATIASVVATSNVRNNNIAVTRGTPNHPTYKEMIRNAIATLKERKGSSKRAIAKYIEKTFTHLPTTHSALLSVHLKRLKSQGVLIMVKKSYKLARSNASSPSAQPKRGRPCKPKPNLEQAQPLEVRRNTKQLLVALGLEDEPASSGVKRGPGRPPKERAMEVSEPRIRRSIRVKTEPERHPKPKSIYEIPNGPKRGVGRPPKNQSNVPIIPFAPTVTVPVMPIAHPRGKGHPKKINAATVSHSGDVPQAIGGGRGRGRGISAGSTVLFMSLDEEQATSDSDDLRRKLRYFQSKVRESLVPIKGIIQELETLASIDLN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0712 325 Gene3D - 30 114 IPR036388 -
Sto4g0712 325 CDD H15 32 114 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0712 325 PRINTS AT-hook-like domain signature 156 166 IPR017956 GO:0003677
Sto4g0712 325 PRINTS AT-hook-like domain signature 200 211 IPR017956 GO:0003677
Sto4g0712 325 PRINTS AT-hook-like domain signature 232 242 IPR017956 GO:0003677
Sto4g0712 325 PANTHER HISTONE H1-LIKE 19 266 - -
Sto4g0712 325 MobiDBLite consensus disorder prediction 159 193 - -
Sto4g0712 325 SUPERFAMILY "Winged helix" DNA-binding domain 32 113 IPR036390 -
Sto4g0712 325 PANTHER HISTONE H1 19 266 - -
Sto4g0712 325 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 34 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0712 325 MobiDBLite consensus disorder prediction 103 129 - -
Sto4g0712 325 SMART h15plus2 32 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0712 325 MobiDBLite consensus disorder prediction 146 217 - -
Sto4g0712 325 Pfam linker histone H1 and H5 family 35 97 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0712 Sto-Chr4 4723493 4724848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0712 41 104 Single Myb Histone (SMH) Gene Family AT1G49950 45.312 4.59e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0712 - - aprc:113856313 211.46