Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0711 ATGCCTTCCATGGTAGATTTGCAAGTCAATTATATTGGAGGTATTTGGTGTTTCTGGGTCAATGAAGATTTTGAGGTTGTGGTGTTGAAGAAGCATACAATTGTAGTGGAATCTCTGCTTAGCAAAGTCGTGGAGGAGTGTGAACGTTGCGTGTTAATCCAACATGAAATGGGGCCAATATCAGATTCTGATGTTGGAATATCAGGATCGGGTGCCCAATATACTTATGATAAGTTTCCGTCGAACATCAGAACCGAAAAGCAACTAGAAGAAAAGAGGAAGCAGATTCTTGCAACAGCAAGTAGTGCCTTTGAGTACTTGGGAAGGCATACTCCAAGGCATGACTTGACTGTCGTTGGTTTATTTTCCTTCAAAGGACTTAGCTTGATGATATACAATGCAATCGCGGCTCTGAAAAAGAGAAATGGGTCCAGCAAGAGAGCTATCGCCAAGTATATAGACCAAACCTTCACCCACCTCCCATCCACTCACTCCGCTTTGTTGACTCTCCATTTGAAGCGCTTGAAGAGCAAAGGTGTCCTCGTTATGGTCAAGAAATCTTACAAGTTTGCTAGATCTTATGCTTCCTCTCATCCCACCCAACCCAAACGTGGTCGACCTCGCAAGCCCAAACCCAAGCCTAAGCCCAACCCAGAACAACCCCAATCGCTAGAGGCTCGTAACAATGCGAAGCGAATTTTGGTGGCGCTTGGGCTTGAAGAAGAGCTCGCAAACTCTGGGGTGAAGAAGAGGGGTCTGGGTCGTCCACCCAAGGACAGCGCAGTGGAAGAACAAGCTACATCTGATAGTGATGATCTGAGGAGGAAGCTTCGATATTTTCAATCAAAAGTCAGGGAATCTCTTGTTCCAATTAAGGGCATAATTCAAGAATTGGAGACGCTGGCATCAATGGACCTTAATTAG 924 0.4524 MPSMVDLQVNYIGGIWCFWVNEDFEVVVLKKHTIVVESLLSKVVEECERCVLIQHEMGPISDSDVGISGSGAQYTYDKFPSNIRTEKQLEEKRKQILATASSAFEYLGRHTPRHDLTVVGLFSFKGLSLMIYNAIAALKKRNGSSKRAIAKYIDQTFTHLPSTHSALLTLHLKRLKSKGVLVMVKKSYKFARSYASSHPTQPKRGRPRKPKPKPKPNPEQPQSLEARNNAKRILVALGLEEELANSGVKKRGLGRPPKDSAVEEQATSDSDDLRRKLRYFQSKVRESLVPIKGIIQELETLASMDLN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0711 307 MobiDBLite consensus disorder prediction 246 270 - -
Sto4g0711 307 Gene3D - 125 204 IPR036388 -
Sto4g0711 307 PANTHER HISTONE H1 130 193 - -
Sto4g0711 307 SUPERFAMILY "Winged helix" DNA-binding domain 127 202 IPR036390 -
Sto4g0711 307 PANTHER HISTONE H1-LIKE 130 193 - -
Sto4g0711 307 SMART h15plus2 123 187 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0711 307 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 123 192 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0711 307 MobiDBLite consensus disorder prediction 193 228 - -
Sto4g0711 307 Pfam linker histone H1 and H5 family 130 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0711 307 CDD H15 130 191 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0711 Sto-Chr4 4714525 4720132 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0711 127 198 Single Myb Histone (SMH) Gene Family AT1G49950 41.096 7.11e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0711 - - jre:108980968 107.457