Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0702 ATGGACCCAACCTCGATCCCACCTCTGCCCATCGTCACCTCCGTTGTTGCCACAGTAGATGAACAAAACAGCAACGTTGTAGTGGCCCATGGAACTCCAAACCATCCAACTTATAAAGAGATGATACACAATGCAATCGCGGCTCTGAAAAAGAGAAATGGGTCCAGCAAGAGAGCTATCGCCAAGTATATAGACCAAACCTTCACCCACCTCCCATCCACTCACTCCGCTTTGTTGACTCTCCATTTGAAGCGCTTGAAGAGCAAAGGTGTCCTCGTTATGGTCAAGAAATCTTACAAGGTTGCTAGATCTTATGCTTCCTCTCATCCCACCCAACCCAAACGTGGTCGACCTCGCAAGCCCAACCCAGAACAACCCCAATCGCTAGAGGCTCGTAACAATGCGAAGCGAATGTTGGTGGCGCTTGGGCTTGAAGATGAGCTCGCAAACTCTGAGGTGAAGAAGAGGGGTCTGGGTCGTCCACCCAAGGACAACGCAATGGAAGAACAAGCTACATCTGATAGTGATGATCTGAGGAGGAAGCTTCGATATTTTCAATCAAAAGTCAGGGAATCTCTTGTTCCAATTAATGGCATAATTCAAGAATTGGAGACGCTGGCATCAATGGACCTTAATTAG 639 0.4789 MDPTSIPPLPIVTSVVATVDEQNSNVVVAHGTPNHPTYKEMIHNAIAALKKRNGSSKRAIAKYIDQTFTHLPSTHSALLTLHLKRLKSKGVLVMVKKSYKVARSYASSHPTQPKRGRPRKPNPEQPQSLEARNNAKRMLVALGLEDELANSEVKKRGLGRPPKDNAMEEQATSDSDDLRRKLRYFQSKVRESLVPINGIIQELETLASMDLN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0702 212 Pfam linker histone H1 and H5 family 35 97 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0702 212 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 34 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0702 212 Gene3D - 30 114 IPR036388 -
Sto4g0702 212 SMART h15plus2 32 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0702 212 MobiDBLite consensus disorder prediction 103 132 - -
Sto4g0702 212 CDD H15 32 102 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto4g0702 212 PANTHER HISTONE H1 19 103 - -
Sto4g0702 212 PANTHER HISTONE H1 113 210 - -
Sto4g0702 212 SUPERFAMILY "Winged helix" DNA-binding domain 32 113 IPR036390 -
Sto4g0702 212 MobiDBLite consensus disorder prediction 152 175 - -
Sto4g0702 212 PANTHER HISTONE H1-LIKE 113 210 - -
Sto4g0702 212 PANTHER HISTONE H1-LIKE 19 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0702 Sto-Chr4 4654064 4655165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0702 19 109 Single Myb Histone (SMH) Gene Family AT1G49950 36.170 2.04e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0702 - - aprc:113856313 139.043