Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0689 ATGTGGATGGTGGGTTACAATGACGGTGGTGAGGATCATCACTCATTCAGTAGCGGAAGAAAACTGAGACCTCTCATTCCAAGAGGGCCAGTGATGAGTAGTACTTCTTCTCCCAACAATACAACTTCAACAACACCTCCTTCTTCCTTAAGCCGTATTCACCATGGCACCGATTTCTTTTCTCAATATCACAATCTAGAGCAGAGCAAGAGAGAGTTCAATACTAGTCCACCGGTTGTGGTGAGCTCAAGGTGGAACCCAACTCCTGAGCAGCTAAGAGCACTGGAAGAATTGTATCGGCGAGGAACAAGAACACCATCTGCAGAGGAAATTCAACACATTACTGCACAGCTGAGGAGATTTGGTAAGATTGAAGGCAAGAATGTTTTCTATTGGTTTCAGAACCACAAAGCCAGAGAGAGGCAAAAACGGCGCCGTCAGATGGAGTCACCTGCACCTGATAGCCTAGACAAGGAAGACTTGGGCGCAAGTAGGACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCAGTACACTTGCAGAGGGGGGGTTTTTGGGGCTTGTGCTTAATATTCATGTCATTTGGGGAATCTGTGGTCTCAATACAAAGAGCAGCAAAAGCTGCAGACTACTGCAAAACAGATGGGTGGATCCAATTGGATGA 681 0.4655 MWMVGYNDGGEDHHSFSSGRKLRPLIPRGPVMSSTSSPNNTTSTTPPSSLSRIHHGTDFFSQYHNLEQSKREFNTSPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESPAPDSLDKEDLGASRTVFEVEQTKNWAPSTNCSTLAEGGFLGLVLNIHVIWGICGLNTKSSKSCRLLQNRWVDPIG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0689 226 MobiDBLite consensus disorder prediction 144 161 - -
Sto4g0689 226 MobiDBLite consensus disorder prediction 141 161 - -
Sto4g0689 226 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 155 - -
Sto4g0689 226 MobiDBLite consensus disorder prediction 1 53 - -
Sto4g0689 226 MobiDBLite consensus disorder prediction 30 53 - -
Sto4g0689 226 SMART HOX_1 80 147 IPR001356 GO:0003677
Sto4g0689 226 Gene3D - 80 143 - -
Sto4g0689 226 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 40 155 IPR044555 GO:0003700|GO:0099402
Sto4g0689 226 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Sto4g0689 226 SUPERFAMILY Homeodomain-like 83 149 IPR009057 -
Sto4g0689 226 CDD homeodomain 84 144 IPR001356 GO:0003677
Sto4g0689 226 ProSiteProfiles 'Homeobox' domain profile. 88 143 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0689 Sto-Chr4 4541480 4543263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0689 1 187 Wox Gene Family AT3G18010 52.683 3.53e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto4g0689 Homeodomain 5.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0689 - - gmx:100777274 270.011